Analysis of interatomic Contacts of Structural Units in PDB entry:
2M6K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2M6K entry

There is 1 chain in PDB entry 2M6K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24PHE 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2M6K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 60Right-handed alpha
Helix 2
2
A
83 92Right-handed alpha
Helix 3
3
A
104 111Right-handed alpha
Helix 4
4
A
126 137Right-handed alpha
Helix 5
5
A
148 158Right-handed alpha
Helix 6
6
A
162 182Right-handed alpha
Helix 7
7
A
210 220Right-handed alpha
Helix 8
8
A
229 234Right-handed 310
Helix 9
9
A
265 273Right-handed alpha
Helix 10
10
A
275 280Right-handed alpha
Helix 11
11
A
281 286Right-handed alpha
Helix 12
12
A
300 315Right-handed alpha
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There are 3 sheets in PDB entry 2M6K. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
37 39anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
115 118parallel
Strand 3
A
139 141parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 205first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
259 263parallel
Strand 4
A
289 293parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il