Analysis of interatomic Contacts of Structural Units in PDB entry:
2NSI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NSI entry

There are 4 chains in PDB entry 2NSI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 83GLN 502
B
ARG 83GLN 502
C
ARG 83GLN 502
D
ARG 83GLN 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 80 helices in PDB entry 2NSI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
100 102Right-handed 310
Helix 2
2
A
123 125Right-handed 310
Helix 3
3
A
136 153Right-handed alpha
Helix 4
4
A
159 176Right-handed alpha
Helix 5
5
A
183 195Right-handed alpha
Helix 6
6
A
203 205Right-handed 310
Helix 7
7
A
220 238Right-handed alpha
Helix 8
8
A
281 292Right-handed 310
Helix 9
9
A
323 325Right-handed 310
Helix 10
10
A
337 342Right-handed 310
Helix 11
11
A
375 379Right-handed alpha
Helix 12
12
A
381 384Right-handed alpha
Helix 13
13
A
392 398Right-handed alpha
Helix 14
14
A
406 408Right-handed 310
Helix 15
15
A
410 428Right-handed alpha
Helix 16
16
A
436 453Right-handed alpha
Helix 17
17
A
461 464Right-handed alpha
Helix 18
18
A
470 472Right-handed 310
Helix 19
19
A
474 477Right-handed alpha
Helix 20
20
A
495 498Right-handed alpha
Helix 21
21
B
100 102Right-handed 310
Helix 22
22
B
123 125Right-handed 310
Helix 23
23
B
136 153Right-handed alpha
Helix 24
24
B
159 176Right-handed alpha
Helix 25
25
B
183 195Right-handed alpha
Helix 26
26
B
203 205Right-handed 310
Helix 27
27
B
220 238Right-handed alpha
Helix 28
28
B
281 292Right-handed 310
Helix 29
29
B
323 325Right-handed 310
Helix 30
30
B
337 342Right-handed 310
Helix 31
31
B
375 379Right-handed alpha
Helix 32
32
B
381 384Right-handed alpha
Helix 33
33
B
392 398Right-handed alpha
Helix 34
34
B
406 408Right-handed 310
Helix 35
35
B
410 428Right-handed alpha
Helix 36
36
B
436 453Right-handed alpha
Helix 37
37
B
461 464Right-handed alpha
Helix 38
38
B
470 472Right-handed 310
Helix 39
39
B
474 477Right-handed alpha
Helix 40
40
B
495 498Right-handed alpha
Helix 41
41
C
100 102Right-handed 310
Helix 42
42
C
123 125Right-handed 310
Helix 43
43
C
136 153Right-handed alpha
Helix 44
44
C
159 176Right-handed alpha
Helix 45
45
C
183 195Right-handed alpha
Helix 46
46
C
203 205Right-handed 310
Helix 47
47
C
220 238Right-handed alpha
Helix 48
48
C
281 292Right-handed 310
Helix 49
49
C
323 325Right-handed 310
Helix 50
50
C
337 342Right-handed 310
Helix 51
51
C
375 379Right-handed alpha
Helix 52
52
C
381 384Right-handed alpha
Helix 53
53
C
392 398Right-handed alpha
Helix 54
54
C
406 408Right-handed 310
Helix 55
55
C
410 428Right-handed alpha
Helix 56
56
C
436 453Right-handed alpha
Helix 57
57
C
461 464Right-handed alpha
Helix 58
58
C
470 472Right-handed 310
Helix 59
59
C
474 477Right-handed alpha
Helix 60
60
C
495 498Right-handed alpha
Helix 61
61
D
100 102Right-handed 310
Helix 62
62
D
123 125Right-handed 310
Helix 63
63
D
136 153Right-handed alpha
Helix 64
64
D
159 176Right-handed alpha
Helix 65
65
D
183 195Right-handed alpha
Helix 66
66
D
203 205Right-handed 310
Helix 67
67
D
220 238Right-handed alpha
Helix 68
68
D
281 292Right-handed 310
Helix 69
69
D
323 325Right-handed 310
Helix 70
70
D
337 342Right-handed 310
Helix 71
71
D
375 379Right-handed alpha
Helix 72
72
D
381 384Right-handed alpha
Helix 73
73
D
392 398Right-handed alpha
Helix 74
74
D
406 408Right-handed 310
Helix 75
75
D
410 428Right-handed alpha
Helix 76
76
D
436 453Right-handed alpha
Helix 77
77
D
461 464Right-handed alpha
Helix 78
78
D
470 472Right-handed 310
Helix 79
79
D
474 477Right-handed alpha
Helix 80
80
D
495 498Right-handed alpha
Back to top of page

There are 24 sheets in PDB entry 2NSI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
85 88first strand
Strand 2
A
95 98anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
210 214first strand
Strand 2
A
243 247parallel
Strand 3
A
367 372anti-parallel
Strand 4
A
349 352anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
269 271first strand
Strand 2
A
277 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
307 309first strand
Strand 2
A
317 319anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
328 331first strand
Strand 2
A
344 347anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
488 491first strand
Strand 2
A
355 359anti-parallel
Strand 3
A
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
85 88first strand
Strand 2
B
95 98anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
210 214first strand
Strand 2
B
243 247parallel
Strand 3
B
367 372anti-parallel
Strand 4
B
349 352anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
269 271first strand
Strand 2
B
277 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
307 309first strand
Strand 2
B
317 319anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
328 331first strand
Strand 2
B
344 347anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
488 491first strand
Strand 2
B
355 359anti-parallel
Strand 3
B
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
85 88first strand
Strand 2
C
95 98anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
210 214first strand
Strand 2
C
243 247parallel
Strand 3
C
367 372anti-parallel
Strand 4
C
349 352anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
269 271first strand
Strand 2
C
277 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
307 309first strand
Strand 2
C
317 319anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
328 330first strand
Strand 2
C
345 347anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
488 491first strand
Strand 2
C
355 359anti-parallel
Strand 3
C
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
85 88first strand
Strand 2
D
95 98anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
210 214first strand
Strand 2
D
243 247parallel
Strand 3
D
367 372anti-parallel
Strand 4
D
349 352anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
269 271first strand
Strand 2
D
277 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
307 309first strand
Strand 2
D
317 319anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
328 331first strand
Strand 2
D
344 347anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
488 490first strand
Strand 2
D
356 359anti-parallel
Strand 3
D
362 364anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il