Analysis of interatomic Contacts of Structural Units in PDB entry:
2NW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2NW2 entry

There are 2 chains in PDB entry 2NW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 206
B
 ASP 1ASP 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2NW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 85Right-handed 310
Helix 2
2
A
169 172Right-handed 310
Helix 3
3
A
188 193Right-handed alpha
Helix 4
4
B
83 87Right-handed 310
Helix 5
5
B
119 123Right-handed 310
Helix 6
6
B
134 142Right-handed alpha
Helix 7
7
B
201 205Right-handed alpha
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There are 9 sheets in PDB entry 2NW2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
110 115parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
32 37anti-parallel
Strand 5
A
44 49anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 13first strand
Strand 2
A
110 115parallel
Strand 3
A
86 92anti-parallel
Strand 4
A
105 106anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
72 77anti-parallel
Strand 3
A
62 67anti-parallel
Strand 4
A
53 57anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 160first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
137 142anti-parallel
Strand 4
A
124 130anti-parallel
Strand 5
B
127 132anti-parallel
Strand 6
B
143 153anti-parallel
Strand 7
B
191 200anti-parallel
Strand 8
B
173 175anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
A
173 182anti-parallel
Strand 3
A
137 142anti-parallel
Strand 4
A
124 130anti-parallel
Strand 5
B
127 132anti-parallel
Strand 6
B
143 153anti-parallel
Strand 7
B
191 200anti-parallel
Strand 8
B
180 181anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
19 24anti-parallel
Strand 3
B
74 79anti-parallel
Strand 4
B
66 71anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
112 117parallel
Strand 3
B
88 95anti-parallel
Strand 4
B
31 37anti-parallel
Strand 5
B
43 51anti-parallel
Strand 6
B
54 57anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
112 117parallel
Strand 3
B
88 95anti-parallel
Strand 4
B
107 108anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
158 164anti-parallel
Strand 3
B
210 217anti-parallel
Strand 4
B
236 243anti-parallel
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