Analysis of interatomic Contacts of Structural Units in PDB entry:
2O59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2O59 entry

There are 4 chains in PDB entry 2O59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 C 1 T 7
D
 C 1 T 8
A
 MET 1HIS 658
B
 MET 1GLN 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 2O59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 17Right-handed alpha
Helix 2
2
A
50 55Right-handed alpha
Helix 3
3
A
56 60Right-handed 310
Helix 4
4
A
81 93Right-handed alpha
Helix 5
5
A
105 119Right-handed alpha
Helix 6
6
A
122 127Right-handed alpha
Helix 7
7
A
138 148Right-handed alpha
Helix 8
8
A
155 186Right-handed alpha
Helix 9
9
A
198 214Right-handed alpha
Helix 10
10
A
258 270Right-handed alpha
Helix 11
11
A
293 306Right-handed alpha
Helix 12
12
A
308 322Right-handed alpha
Helix 13
13
A
337 342Right-handed 310
Helix 14
14
A
343 355Right-handed alpha
Helix 15
15
A
356 359Right-handed 310
Helix 16
16
A
374 378Right-handed 310
Helix 17
17
A
396 413Right-handed alpha
Helix 18
18
A
444 450Right-handed 310
Helix 19
19
A
493 502Right-handed alpha
Helix 20
20
A
503 507Right-handed 310
Helix 21
21
A
509 519Right-handed alpha
Helix 22
22
A
527 538Right-handed alpha
Helix 23
23
A
551 561Right-handed alpha
Helix 24
24
A
562 567Right-handed alpha
Helix 25
25
A
568 583Right-handed alpha
Helix 26
26
A
587 608Right-handed alpha
Helix 27
27
A
610 615Right-handed 310
Helix 28
28
A
652 657Right-handed alpha
Helix 29
29
B
8 17Right-handed alpha
Helix 30
30
B
50 54Right-handed 310
Helix 31
31
B
55 60Right-handed 310
Helix 32
32
B
81 95Right-handed alpha
Helix 33
33
B
105 119Right-handed alpha
Helix 34
34
B
122 127Right-handed alpha
Helix 35
35
B
138 148Right-handed alpha
Helix 36
36
B
155 187Right-handed alpha
Helix 37
37
B
198 216Right-handed alpha
Helix 38
38
B
243 250Right-handed 310
Helix 39
39
B
258 270Right-handed alpha
Helix 40
40
B
293 306Right-handed alpha
Helix 41
41
B
308 322Right-handed alpha
Helix 42
42
B
337 342Right-handed 310
Helix 43
43
B
343 355Right-handed alpha
Helix 44
44
B
374 378Right-handed 310
Helix 45
45
B
396 413Right-handed alpha
Helix 46
46
B
444 450Right-handed 310
Helix 47
47
B
451 457Right-handed alpha
Helix 48
48
B
493 502Right-handed alpha
Helix 49
49
B
503 507Right-handed 310
Helix 50
50
B
509 519Right-handed alpha
Helix 51
51
B
527 538Right-handed alpha
Helix 52
52
B
551 561Right-handed alpha
Helix 53
53
B
562 567Right-handed alpha
Helix 54
54
B
568 583Right-handed alpha
Helix 55
55
B
587 608Right-handed alpha
Helix 56
56
B
609 615Right-handed 310
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There are 8 sheets in PDB entry 2O59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
29 31anti-parallel
Strand 3
A
36 40anti-parallel
Strand 4
A
2 6parallel
Strand 5
A
97 101parallel
Strand 6
A
129 131parallel
Strand 7
A
150 151anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
75 77anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 229first strand
Strand 2
A
235 241anti-parallel
Strand 3
A
432 443anti-parallel
Strand 4
A
418 429anti-parallel
Strand 5
A
273 286anti-parallel
Strand 6
A
472 484anti-parallel
Strand 7
A
220 229anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
547 550anti-parallel
Strand 3
A
541 543anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
29 32anti-parallel
Strand 3
B
36 40anti-parallel
Strand 4
B
2 6parallel
Strand 5
B
97 101parallel
Strand 6
B
130 131parallel
Strand 7
B
150 151anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
75 77anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 229first strand
Strand 2
B
235 240anti-parallel
Strand 3
B
432 443anti-parallel
Strand 4
B
418 429anti-parallel
Strand 5
B
273 286anti-parallel
Strand 6
B
472 484anti-parallel
Strand 7
B
220 229anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
491 492first strand
Strand 2
B
547 550anti-parallel
Strand 3
B
541 543anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il