Analysis of interatomic Contacts of Structural Units in PDB entry:
2OHF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OHF entry

There is 1 chain in PDB entry 2OHF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 16ASN 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2OHF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 44Right-handed alpha
Helix 2
2
A
68 79Right-handed alpha
Helix 3
3
A
108 116Right-handed alpha
Helix 4
4
A
141 166Right-handed alpha
Helix 5
5
A
181 193Right-handed alpha
Helix 6
6
A
199 203Right-handed 310
Helix 7
7
A
207 218Right-handed alpha
Helix 8
8
A
219 223Right-handed 310
Helix 9
9
A
232 239Right-handed alpha
Helix 10
10
A
241 255Right-handed alpha
Helix 11
11
A
264 274Right-handed alpha
Helix 12
12
A
275 286Right-handed alpha
Helix 13
13
A
291 303Right-handed alpha
Helix 14
14
A
326 333Right-handed alpha
Helix 15
15
A
336 341Right-handed alpha
Helix 16
16
A
349 357Right-handed alpha
Helix 17
17
A
358 365Right-handed alpha
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There are 3 sheets in PDB entry 2OHF. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
87 92anti-parallel
Strand 3
A
25 28parallel
Strand 4
A
120 125parallel
Strand 5
A
225 230parallel
Strand 6
A
259 263parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
315 322parallel
Strand 3
A
305 311anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 371first strand
Strand 2
A
342 348anti-parallel
Strand 3
A
382 387anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il