Analysis of interatomic Contacts of Structural Units in PDB entry:
2OTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OTZ entry

There is 1 chain in PDB entry 2OTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
MET 1LYS 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2OTZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
X
2 12Right-handed alpha
Helix 2
2
X
38 51Right-handed alpha
Helix 3
3
X
59 80Right-handed alpha
Helix 4
4
X
83 91Right-handed alpha
Helix 5
5
X
92 107Right-handed alpha
Helix 6
6
X
107 113Right-handed alpha
Helix 7
7
X
114 123Right-handed alpha
Helix 8
8
X
125 135Right-handed alpha
Helix 9
9
X
136 142Right-handed alpha
Helix 10
10
X
142 156Right-handed alpha
Helix 11
11
X
158 162Right-handed 310
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There is 1 sheet ( A) in PDB entry 2OTZ.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
14 19first strand
Strand 2
X
25 28anti-parallel
Strand 3
X
31 32anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il