Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2P7V entry
There are 2 chains in PDB entry 2P7V
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
MET 1 | ALA 158 |
B
|
ASP 546 | ASP 613 |
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There are 11
helices in PDB entry 2P7V. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 1 |
13 | Right-handed alpha |
Helix 2 |
2 | A
| 16 |
38 | Right-handed alpha |
Helix 3 |
3 | A
| 51 |
71 | Right-handed alpha |
Helix 4 |
4 | A
| 71 |
78 | Right-handed alpha |
Helix 5 |
5 | A
| 82 |
117 | Right-handed alpha |
Helix 6 |
6 | A
| 119 |
155 | Right-handed alpha |
Helix 7 |
7 | B
| 552 |
563 | Right-handed alpha |
Helix 8 |
8 | B
| 572 |
581 | Right-handed alpha |
Helix 9 |
9 | B
| 583 |
597 | Right-handed alpha |
Helix 10 |
10 | B
| 598 |
600 | Right-handed 310 |
Helix 11 |
11 | B
| 602 |
608 | Right-handed 310 |
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There are no sheets in PDB entry
2P7V
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il