Analysis of interatomic Contacts of Structural Units in PDB entry:
2QRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QRV entry

There are 8 chains in PDB entry 2QRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 623VAL 908
B
MET 178SER 379
C
MET 178SER 379
D
LYS 626VAL 908
E
PRO 623VAL 908
F
MET 178SER 379
G
MET 178SER 379
H
LYS 626VAL 908
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 2QRV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
640 649Right-handed alpha
Helix 2
2
A
662 673Right-handed alpha
Helix 3
3
A
682 686Right-handed 310
Helix 4
4
A
687 694Right-handed alpha
Helix 5
5
A
706 710Right-handed 310
Helix 6
6
A
725 738Right-handed alpha
Helix 7
7
A
758 770Right-handed alpha
Helix 8
8
A
779 781Right-handed 310
Helix 9
9
A
810 814Right-handed 310
Helix 10
10
A
856 865Right-handed alpha
Helix 11
11
A
877 887Right-handed alpha
Helix 12
12
A
890 899Right-handed alpha
Helix 13
13
A
900 905Right-handed 310
Helix 14
14
B
183 187Right-handed 310
Helix 15
15
B
228 235Right-handed alpha
Helix 16
16
B
256 271Right-handed alpha
Helix 17
17
B
291 303Right-handed alpha
Helix 18
18
B
339 352Right-handed alpha
Helix 19
19
B
361 366Right-handed alpha
Helix 20
20
B
367 374Right-handed 310
Helix 21
21
C
183 187Right-handed 310
Helix 22
22
C
228 235Right-handed alpha
Helix 23
23
C
256 270Right-handed alpha
Helix 24
24
C
291 303Right-handed alpha
Helix 25
25
C
339 352Right-handed alpha
Helix 26
26
C
361 366Right-handed alpha
Helix 27
27
C
367 374Right-handed 310
Helix 28
28
D
640 649Right-handed alpha
Helix 29
29
D
662 673Right-handed alpha
Helix 30
30
D
682 686Right-handed 310
Helix 31
31
D
687 694Right-handed alpha
Helix 32
32
D
706 710Right-handed 310
Helix 33
33
D
725 738Right-handed alpha
Helix 34
34
D
758 769Right-handed alpha
Helix 35
35
D
779 781Right-handed 310
Helix 36
36
D
810 815Right-handed 310
Helix 37
37
D
856 865Right-handed alpha
Helix 38
38
D
877 887Right-handed alpha
Helix 39
39
D
890 899Right-handed alpha
Helix 40
40
D
900 905Right-handed 310
Helix 41
41
E
640 649Right-handed alpha
Helix 42
42
E
662 673Right-handed alpha
Helix 43
43
E
682 686Right-handed 310
Helix 44
44
E
687 694Right-handed alpha
Helix 45
45
E
706 710Right-handed 310
Helix 46
46
E
725 738Right-handed alpha
Helix 47
47
E
758 770Right-handed alpha
Helix 48
48
E
779 781Right-handed 310
Helix 49
49
E
810 815Right-handed 310
Helix 50
50
E
856 864Right-handed alpha
Helix 51
51
E
877 888Right-handed alpha
Helix 52
52
E
890 899Right-handed alpha
Helix 53
53
E
900 905Right-handed 310
Helix 54
54
F
183 187Right-handed 310
Helix 55
55
F
228 235Right-handed alpha
Helix 56
56
F
256 270Right-handed alpha
Helix 57
57
F
291 303Right-handed alpha
Helix 58
58
F
339 352Right-handed alpha
Helix 59
59
F
361 366Right-handed alpha
Helix 60
60
F
367 374Right-handed 310
Helix 61
61
G
183 187Right-handed 310
Helix 62
62
G
228 235Right-handed alpha
Helix 63
63
G
256 270Right-handed alpha
Helix 64
64
G
291 303Right-handed alpha
Helix 65
65
G
339 352Right-handed alpha
Helix 66
66
G
361 366Right-handed alpha
Helix 67
67
G
367 374Right-handed 310
Helix 68
68
H
640 649Right-handed alpha
Helix 69
69
H
662 673Right-handed alpha
Helix 70
70
H
682 686Right-handed 310
Helix 71
71
H
687 694Right-handed alpha
Helix 72
72
H
706 710Right-handed 310
Helix 73
73
H
725 738Right-handed alpha
Helix 74
74
H
758 770Right-handed alpha
Helix 75
75
H
779 781Right-handed 310
Helix 76
76
H
810 815Right-handed 310
Helix 77
77
H
856 865Right-handed alpha
Helix 78
78
H
877 888Right-handed alpha
Helix 79
79
H
890 898Right-handed alpha
Helix 80
80
H
899 904Right-handed 310
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There are 12 sheets in PDB entry 2QRV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
677 680first strand
Strand 2
A
653 659parallel
Strand 3
A
630 635parallel
Strand 4
A
699 702parallel
Strand 5
A
748 754parallel
Strand 6
A
787 792anti-parallel
Strand 7
A
776 777anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
820 821first strand
Strand 2
A
846 848anti-parallel
Strand 3
A
851 853anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
218 221first strand
Strand 2
B
192 195parallel
Strand 3
B
240 244parallel
Strand 4
B
281 286parallel
Strand 5
B
322 325anti-parallel
Strand 6
B
307 308anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
218 221first strand
Strand 2
C
192 195parallel
Strand 3
C
240 244parallel
Strand 4
C
281 286parallel
Strand 5
C
322 325anti-parallel
Strand 6
C
307 308anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
677 680first strand
Strand 2
D
653 659parallel
Strand 3
D
630 635parallel
Strand 4
D
699 702parallel
Strand 5
D
748 754parallel
Strand 6
D
787 792anti-parallel
Strand 7
D
776 777anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
819 821first strand
Strand 2
D
846 848anti-parallel
Strand 3
D
851 853anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
677 680first strand
Strand 2
E
653 659parallel
Strand 3
E
630 635parallel
Strand 4
E
699 702parallel
Strand 5
E
748 754parallel
Strand 6
E
787 792anti-parallel
Strand 7
E
776 777anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
820 821first strand
Strand 2
E
846 847anti-parallel
Strand 3
E
852 853anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
218 221first strand
Strand 2
F
192 195parallel
Strand 3
F
240 244parallel
Strand 4
F
281 286parallel
Strand 5
F
322 325anti-parallel
Strand 6
F
307 308anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
218 221first strand
Strand 2
G
192 195parallel
Strand 3
G
240 244parallel
Strand 4
G
281 286parallel
Strand 5
G
322 325anti-parallel
Strand 6
G
307 308anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
677 680first strand
Strand 2
H
653 659parallel
Strand 3
H
630 635parallel
Strand 4
H
699 702parallel
Strand 5
H
748 754parallel
Strand 6
H
787 792anti-parallel
Strand 7
H
776 777anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
820 821first strand
Strand 2
H
846 847anti-parallel
Strand 3
H
852 853anti-parallel
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