Analysis of interatomic Contacts of Structural Units in PDB entry:
2RHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RHI entry

There are 2 chains in PDB entry 2RHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
CYS 205ASP 528
B
THR 24LYS 25
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2RHI. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
207 216Right-handed alpha
Helix 2
2
A
221 225Right-handed 310
Helix 3
3
A
226 231Right-handed alpha
Helix 4
4
A
276 280Right-handed 310
Helix 5
5
A
294 300Right-handed alpha
Helix 6
6
A
310 314Right-handed 310
Helix 7
7
A
315 324Right-handed alpha
Helix 8
8
A
329 333Right-handed 310
Helix 9
9
A
383 387Right-handed 310
Helix 10
10
A
401 407Right-handed alpha
Helix 11
11
A
418 422Right-handed 310
Helix 12
12
A
423 432Right-handed alpha
Helix 13
13
A
437 441Right-handed 310
Helix 14
14
A
487 491Right-handed 310
Helix 15
15
A
505 511Right-handed alpha
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There are 4 sheets in PDB entry 2RHI. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
281 284first strand
Strand 2
A
267 272anti-parallel
Strand 3
A
251 264anti-parallel
Strand 4
A
243 248anti-parallel
Strand 5
A
290 291anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
388 390first strand
Strand 2
A
374 379anti-parallel
Strand 3
A
358 371anti-parallel
Strand 4
A
350 355anti-parallel
Strand 5
A
397 398anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
388 390first strand
Strand 2
A
374 379anti-parallel
Strand 3
A
358 371anti-parallel
Strand 4
A
410 411parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
492 495first strand
Strand 2
A
478 483anti-parallel
Strand 3
A
466 474anti-parallel
Strand 4
A
454 458anti-parallel
Strand 5
A
501 502anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il