Analysis of interatomic Contacts of Structural Units in PDB entry:
2RLI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RLI entry

There is 1 chain in PDB entry 2RLI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 97SER 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 2RLI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
136 154Right-handed alpha
Helix 2
2
A
173 183Right-handed alpha
Helix 3
3
A
194 205Right-handed alpha
Helix 4
4
A
246 262Right-handed alpha
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There are 2 sheets in PDB entry 2RLI. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
105 108anti-parallel
Strand 3
A
190 192anti-parallel
Strand 4
A
160 166parallel
Strand 5
A
123 129parallel
Strand 6
A
227 231anti-parallel
Strand 7
A
237 242anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
222 223anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il