Analysis of interatomic Contacts of Structural Units in PDB entry:
2RNM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RNM entry

There are 5 chains in PDB entry 2RNM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 217HIS 295
B
 MET 217HIS 295
C
 MET 217HIS 295
D
 MET 217HIS 295
E
 MET 217HIS 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page
There are no helices in PDB entry 2RNM

There are 3 sheets in PDB entry 2RNM. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 233first strand
Strand 2
A
261 269parallel
Strand 3
B
225 233parallel
Strand 4
B
261 269parallel
Strand 5
C
226 233parallel
Strand 6
C
262 269parallel
Strand 7
D
226 233parallel
Strand 8
D
263 269parallel
Strand 9
E
226 233parallel
Strand 10
E
262 268parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
274 277parallel
Strand 3
B
238 241parallel
Strand 4
B
274 277parallel
Strand 5
C
238 241parallel
Strand 6
C
274 277parallel
Strand 7
D
238 241parallel
Strand 8
D
274 277parallel
Strand 9
E
238 241parallel
Strand 10
E
274 277parallel
Back to list of sheets
Back to top of page

There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 245first strand
Strand 2
A
280 281parallel
Strand 3
B
244 245parallel
Strand 4
B
280 281parallel
Strand 5
C
244 245parallel
Strand 6
C
280 281parallel
Strand 7
D
244 245parallel
Strand 8
D
280 281parallel
Strand 9
E
244 245parallel
Strand 10
E
280 281parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il