Analysis of interatomic Contacts of Structural Units in PDB entry:
2RVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RVE entry

There are 6 chains in PDB entry 2RVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
C 1 G 8
D
C 1 G 8
E
C 1 G 8
F
C 1 G 8
A
SER 2ILE 240
B
SER 2TYR 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2RVE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 12Right-handed alpha
Helix 2
2
A
38 47Right-handed alpha
Helix 3
3
A
47 58Right-handed alpha
Helix 4
4
A
112 117Right-handed alpha
Helix 5
5
A
124 126Right-handed 310
Helix 6
6
A
154 159Right-handed 310
Helix 7
7
A
173 176Right-handed alpha
Helix 8
8
A
195 202Right-handed alpha
Helix 9
9
A
208 218Right-handed alpha
Helix 10
10
A
232 239Right-handed alpha
Helix 11
11
B
2 12Right-handed alpha
Helix 12
12
B
36 59Right-handed alpha
Helix 13
13
B
124 126Right-handed 310
Helix 14
14
B
154 159Right-handed 310
Helix 15
15
B
173 177Right-handed alpha
Helix 16
16
B
195 202Right-handed alpha
Helix 17
17
B
208 219Right-handed alpha
Helix 18
18
B
232 240Right-handed alpha
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There are 5 sheets in PDB entry 2RVE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
30 32first strand
Strand 2
A
20 24anti-parallel
Strand 3
B
23 25anti-parallel
Strand 4
B
29 31anti-parallel
Strand 5
B
151 152anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
62 64first strand
Strand 2
A
75 79anti-parallel
Strand 3
A
82 96anti-parallel
Strand 4
A
128 139parallel
Strand 5
A
164 172anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
106 109first strand
Strand 2
A
188 191anti-parallel
Strand 3
A
177 181anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
62 64first strand
Strand 2
B
75 78anti-parallel
Strand 3
B
86 96anti-parallel
Strand 4
B
128 139parallel
Strand 5
B
167 172anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
106 109first strand
Strand 2
B
188 190anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il