Analysis of interatomic Contacts of Structural Units in PDB entry:
2V6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2V6H entry

There is 1 chain in PDB entry 2V6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 151GLU 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2V6H. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
200 203Right-handed 310
Helix 2
2
A
230 234Right-handed 310
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There are 2 sheets in PDB entry 2V6H. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
164 167first strand
Strand 2
A
247 257parallel
Strand 3
A
235 242anti-parallel
Strand 4
A
188 193anti-parallel
Strand 5
A
197 198anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
172 179first strand
Strand 2
A
219 226anti-parallel
Strand 3
A
207 214anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il