Analysis of interatomic Contacts of Structural Units in PDB entry:
2WCD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WCD entry

There are 5 chains in PDB entry 2WCD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 8HIS 292
B
LYS 8HIS 292
C
LYS 8HIS 292
D
LYS 8HIS 292
E
LYS 8GLN 139
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are168 helices in PDB entry 2WCD. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
10 35Right-handed alpha
Helix 2
2
A
36 101Right-handed alpha
Helix 3
3
A
108 182Right-handed alpha
Helix 4
4
A
183 186Right-handed 310
Helix 5
5
A
188 206Right-handed alpha
Helix 6
6
A
206 265Right-handed alpha
Helix 7
7
A
271 292Right-handed alpha
Helix 8
8
B
10 35Right-handed alpha
Helix 9
9
B
36 101Right-handed alpha
Helix 10
10
B
108 182Right-handed alpha
Helix 11
11
B
183 186Right-handed 310
Helix 12
12
B
188 206Right-handed alpha
Helix 13
13
B
206 265Right-handed alpha
Helix 14
14
B
271 292Right-handed alpha
Helix 15
15
C
10 35Right-handed alpha
Helix 16
16
C
36 101Right-handed alpha
Helix 17
17
C
108 182Right-handed alpha
Helix 18
18
C
183 186Right-handed 310
Helix 19
19
C
188 206Right-handed alpha
Helix 20
20
C
206 265Right-handed alpha
Helix 21
21
C
271 292Right-handed alpha
Helix 22
22
D
10 35Right-handed alpha
Helix 23
23
D
36 101Right-handed alpha
Helix 24
24
D
108 182Right-handed alpha
Helix 25
25
D
183 186Right-handed 310
Helix 26
26
D
188 206Right-handed alpha
Helix 27
27
D
206 265Right-handed alpha
Helix 28
28
D
271 292Right-handed alpha
Helix 29
29
E
10 35Right-handed alpha
Helix 30
30
E
36 101Right-handed alpha
Helix 31
31
E
108 182Right-handed alpha
Helix 32
32
E
183 186Right-handed 310
Helix 33
33
E
188 206Right-handed alpha
Helix 34
34
E
206 265Right-handed alpha
Helix 35
35
E
271 291Right-handed alpha
Helix 36
36
F
10 35Right-handed alpha
Helix 37
37
F
36 101Right-handed alpha
Helix 38
38
F
108 182Right-handed alpha
Helix 39
39
F
183 186Right-handed 310
Helix 40
40
F
188 206Right-handed alpha
Helix 41
41
F
206 265Right-handed alpha
Helix 42
42
F
271 292Right-handed alpha
Helix 43
43
G
10 35Right-handed alpha
Helix 44
44
G
36 101Right-handed alpha
Helix 45
45
G
108 182Right-handed alpha
Helix 46
46
G
183 186Right-handed 310
Helix 47
47
G
188 206Right-handed alpha
Helix 48
48
G
206 265Right-handed alpha
Helix 49
49
G
271 292Right-handed alpha
Helix 50
50
H
10 35Right-handed alpha
Helix 51
51
H
36 101Right-handed alpha
Helix 52
52
H
108 182Right-handed alpha
Helix 53
53
H
183 186Right-handed 310
Helix 54
54
H
188 206Right-handed alpha
Helix 55
55
H
206 265Right-handed alpha
Helix 56
56
H
271 292Right-handed alpha
Helix 57
57
I
10 35Right-handed alpha
Helix 58
58
I
36 101Right-handed alpha
Helix 59
59
I
108 182Right-handed alpha
Helix 60
60
I
183 186Right-handed 310
Helix 61
61
I
188 206Right-handed alpha
Helix 62
62
I
206 265Right-handed alpha
Helix 63
63
I
271 292Right-handed alpha
Helix 64
64
J
10 35Right-handed alpha
Helix 65
65
J
36 101Right-handed alpha
Helix 66
66
J
108 182Right-handed alpha
Helix 67
67
J
183 186Right-handed 310
Helix 68
68
J
188 206Right-handed alpha
Helix 69
69
J
206 265Right-handed alpha
Helix 70
70
J
271 292Right-handed alpha
Helix 71
71
K
10 35Right-handed alpha
Helix 72
72
K
36 101Right-handed alpha
Helix 73
73
K
108 182Right-handed alpha
Helix 74
74
K
183 186Right-handed 310
Helix 75
75
K
188 206Right-handed alpha
Helix 76
76
K
206 265Right-handed alpha
Helix 77
77
K
271 292Right-handed alpha
Helix 78
78
L
10 35Right-handed alpha
Helix 79
79
L
36 101Right-handed alpha
Helix 80
80
L
108 182Right-handed alpha
Helix 81
81
L
183 186Right-handed 310
Helix 82
82
L
188 206Right-handed alpha
Helix 83
83
L
206 265Right-handed alpha
Helix 84
84
L
271 292Right-handed alpha
Helix 85
85
M
10 35Right-handed alpha
Helix 86
86
M
36 101Right-handed alpha
Helix 87
87
M
108 182Right-handed alpha
Helix 88
88
M
183 186Right-handed 310
Helix 89
89
M
188 206Right-handed alpha
Helix 90
90
M
206 265Right-handed alpha
Helix 91
91
M
271 292Right-handed alpha
Helix 92
92
N
10 35Right-handed alpha
Helix 93
93
N
36 101Right-handed alpha
Helix 94
94
N
108 182Right-handed alpha
Helix 95
95
N
183 186Right-handed 310
Helix 96
96
N
188 206Right-handed alpha
Helix 97
97
N
206 265Right-handed alpha
Helix 98
98
N
271 291Right-handed alpha
Helix 99
99
O
10 35Right-handed alpha
Helix 100
100
O
36 101Right-handed alpha
Helix 101
101
O
108 182Right-handed alpha
Helix 102
102
O
183 186Right-handed 310
Helix 103
103
O
188 206Right-handed alpha
Helix 104
104
O
206 265Right-handed alpha
Helix 105
105
O
271 292Right-handed alpha
Helix 106
106
P
10 35Right-handed alpha
Helix 107
107
P
36 101Right-handed alpha
Helix 108
108
P
108 182Right-handed alpha
Helix 109
109
P
183 186Right-handed 310
Helix 110
110
P
188 206Right-handed alpha
Helix 111
111
P
206 265Right-handed alpha
Helix 112
112
P
271 292Right-handed alpha
Helix 113
113
Q
10 35Right-handed alpha
Helix 114
114
Q
36 101Right-handed alpha
Helix 115
115
Q
108 182Right-handed alpha
Helix 116
116
Q
183 186Right-handed 310
Helix 117
117
Q
188 206Right-handed alpha
Helix 118
118
Q
206 265Right-handed alpha
Helix 119
119
Q
271 292Right-handed alpha
Helix 120
120
R
10 35Right-handed alpha
Helix 121
121
R
36 101Right-handed alpha
Helix 122
122
R
108 182Right-handed alpha
Helix 123
123
R
183 186Right-handed 310
Helix 124
124
R
188 206Right-handed alpha
Helix 125
125
R
206 265Right-handed alpha
Helix 126
126
R
271 292Right-handed alpha
Helix 127
127
S
10 35Right-handed alpha
Helix 128
128
S
36 101Right-handed alpha
Helix 129
129
S
108 182Right-handed alpha
Helix 130
130
S
183 186Right-handed 310
Helix 131
131
S
188 206Right-handed alpha
Helix 132
132
S
206 265Right-handed alpha
Helix 133
133
S
271 292Right-handed alpha
Helix 134
134
T
10 35Right-handed alpha
Helix 135
135
T
36 101Right-handed alpha
Helix 136
136
T
108 182Right-handed alpha
Helix 137
137
T
183 186Right-handed 310
Helix 138
138
T
188 206Right-handed alpha
Helix 139
139
T
206 265Right-handed alpha
Helix 140
140
T
271 292Right-handed alpha
Helix 141
141
U
10 35Right-handed alpha
Helix 142
142
U
36 101Right-handed alpha
Helix 143
143
U
108 182Right-handed alpha
Helix 144
144
U
183 186Right-handed 310
Helix 145
145
U
188 206Right-handed alpha
Helix 146
146
U
206 265Right-handed alpha
Helix 147
147
U
271 292Right-handed alpha
Helix 148
148
V
10 35Right-handed alpha
Helix 149
149
V
36 101Right-handed alpha
Helix 150
150
V
108 182Right-handed alpha
Helix 151
151
V
183 186Right-handed 310
Helix 152
152
V
188 206Right-handed alpha
Helix 153
153
V
206 265Right-handed alpha
Helix 154
154
V
271 292Right-handed alpha
Helix 155
155
W
10 35Right-handed alpha
Helix 156
156
W
36 101Right-handed alpha
Helix 157
157
W
108 182Right-handed alpha
Helix 158
158
W
183 186Right-handed 310
Helix 159
159
W
188 206Right-handed alpha
Helix 160
160
W
206 265Right-handed alpha
Helix 161
161
W
271 292Right-handed alpha
Helix 162
162
X
10 35Right-handed alpha
Helix 163
163
X
36 101Right-handed alpha
Helix 164
164
X
108 182Right-handed alpha
Helix 165
165
X
183 186Right-handed 310
Helix 166
166
X
188 206Right-handed alpha
Helix 167
167
X
206 265Right-handed alpha
Helix 168
168
X
271 291Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2WCD

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il