Analysis of interatomic Contacts of Structural Units in PDB entry:
2WIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WIY entry

There is 1 chain in PDB entry 2WIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 159SER 552
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2WIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
160 169Right-handed alpha
Helix 2
2
A
173 179Right-handed alpha
Helix 3
3
A
180 191Right-handed alpha
Helix 4
4
A
205 213Right-handed alpha
Helix 5
5
A
220 226Right-handed alpha
Helix 6
6
A
227 236Right-handed 310
Helix 7
7
A
236 240Right-handed 310
Helix 8
8
A
243 254Right-handed alpha
Helix 9
9
A
257 265Right-handed alpha
Helix 10
10
A
265 278Right-handed alpha
Helix 11
11
A
287 292Right-handed alpha
Helix 12
12
A
292 305Right-handed alpha
Helix 13
13
A
310 323Right-handed alpha
Helix 14
14
A
324 326Right-handed 310
Helix 15
15
A
332 358Right-handed alpha
Helix 16
16
A
362 373Right-handed alpha
Helix 17
17
A
377 392Right-handed alpha
Helix 18
18
A
394 410Right-handed alpha
Helix 19
19
A
410 420Right-handed alpha
Helix 20
20
A
423 435Right-handed alpha
Helix 21
21
A
466 470Right-handed alpha
Helix 22
22
A
487 491Right-handed 310
Helix 23
23
A
498 502Right-handed 310
Helix 24
24
A
505 524Right-handed alpha
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There are 4 sheets in PDB entry 2WIY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
201 203anti-parallel
Strand 3
A
462 465parallel
Strand 4
A
440 445anti-parallel
Strand 5
A
218 219anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
285 286first strand
Strand 2
A
548 552anti-parallel
Strand 3
A
526 529anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
449 451first strand
Strand 2
A
454 456anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
534 535first strand
Strand 2
A
544 546anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il