Analysis of interatomic Contacts of Structural Units in PDB entry:
2WJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WJU entry

There are 8 chains in PDB entry 2WJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2PHE 222
B
ALA 2PHE 222
C
ALA 2PHE 222
D
ALA 2PHE 222
E
ALA 2PHE 222
F
ALA 2PHE 222
G
ALA 2PHE 222
H
ALA 2PHE 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 90 helices in PDB entry 2WJU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
37 47Right-handed alpha
Helix 3
3
A
67 79Right-handed alpha
Helix 4
4
A
85 109Right-handed alpha
Helix 5
5
A
116 131Right-handed alpha
Helix 6
6
A
131 144Right-handed alpha
Helix 7
7
A
154 171Right-handed alpha
Helix 8
8
A
178 189Right-handed alpha
Helix 9
9
A
191 198Right-handed alpha
Helix 10
10
A
209 221Right-handed alpha
Helix 11
11
B
16 26Right-handed alpha
Helix 12
12
B
37 47Right-handed alpha
Helix 13
13
B
67 79Right-handed alpha
Helix 14
14
B
85 109Right-handed alpha
Helix 15
15
B
110 112Right-handed 310
Helix 16
16
B
116 131Right-handed alpha
Helix 17
17
B
131 144Right-handed alpha
Helix 18
18
B
154 171Right-handed alpha
Helix 19
19
B
172 176Right-handed 310
Helix 20
20
B
178 190Right-handed alpha
Helix 21
21
B
191 199Right-handed alpha
Helix 22
22
B
209 221Right-handed alpha
Helix 23
23
C
16 26Right-handed alpha
Helix 24
24
C
37 47Right-handed alpha
Helix 25
25
C
67 79Right-handed alpha
Helix 26
26
C
85 109Right-handed alpha
Helix 27
27
C
110 112Right-handed 310
Helix 28
28
C
116 131Right-handed alpha
Helix 29
29
C
131 144Right-handed alpha
Helix 30
30
C
154 171Right-handed alpha
Helix 31
31
C
178 191Right-handed alpha
Helix 32
32
C
191 199Right-handed alpha
Helix 33
33
C
209 220Right-handed alpha
Helix 34
34
D
13 15Right-handed 310
Helix 35
35
D
16 26Right-handed alpha
Helix 36
36
D
37 47Right-handed alpha
Helix 37
37
D
67 79Right-handed alpha
Helix 38
38
D
85 109Right-handed alpha
Helix 39
39
D
110 112Right-handed 310
Helix 40
40
D
116 131Right-handed alpha
Helix 41
41
D
131 144Right-handed alpha
Helix 42
42
D
154 171Right-handed alpha
Helix 43
43
D
178 190Right-handed alpha
Helix 44
44
D
191 198Right-handed alpha
Helix 45
45
D
209 220Right-handed alpha
Helix 46
46
E
16 26Right-handed alpha
Helix 47
47
E
37 47Right-handed alpha
Helix 48
48
E
67 79Right-handed alpha
Helix 49
49
E
85 109Right-handed alpha
Helix 50
50
E
110 112Right-handed 310
Helix 51
51
E
116 131Right-handed alpha
Helix 52
52
E
131 144Right-handed alpha
Helix 53
53
E
154 171Right-handed alpha
Helix 54
54
E
178 190Right-handed alpha
Helix 55
55
E
191 199Right-handed alpha
Helix 56
56
E
209 220Right-handed alpha
Helix 57
57
F
16 27Right-handed alpha
Helix 58
58
F
37 47Right-handed alpha
Helix 59
59
F
67 79Right-handed alpha
Helix 60
60
F
85 108Right-handed alpha
Helix 61
61
F
116 131Right-handed alpha
Helix 62
62
F
131 144Right-handed alpha
Helix 63
63
F
154 171Right-handed alpha
Helix 64
64
F
173 177Right-handed 310
Helix 65
65
F
178 191Right-handed alpha
Helix 66
66
F
191 199Right-handed alpha
Helix 67
67
F
209 216Right-handed alpha
Helix 68
68
G
16 26Right-handed alpha
Helix 69
69
G
37 47Right-handed alpha
Helix 70
70
G
67 79Right-handed alpha
Helix 71
71
G
85 109Right-handed alpha
Helix 72
72
G
110 112Right-handed 310
Helix 73
73
G
116 131Right-handed alpha
Helix 74
74
G
131 144Right-handed alpha
Helix 75
75
G
154 171Right-handed alpha
Helix 76
76
G
178 190Right-handed alpha
Helix 77
77
G
191 199Right-handed alpha
Helix 78
78
G
209 220Right-handed alpha
Helix 79
79
H
16 26Right-handed alpha
Helix 80
80
H
37 47Right-handed alpha
Helix 81
81
H
67 79Right-handed alpha
Helix 82
82
H
85 109Right-handed alpha
Helix 83
83
H
110 112Right-handed 310
Helix 84
84
H
116 131Right-handed alpha
Helix 85
85
H
132 144Right-handed alpha
Helix 86
86
H
154 171Right-handed alpha
Helix 87
87
H
174 177Right-handed 310
Helix 88
88
H
178 190Right-handed alpha
Helix 89
89
H
191 199Right-handed alpha
Helix 90
90
H
209 221Right-handed alpha
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There are 8 sheets in PDB entry 2WJU. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA, GA, HA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 34first strand
Strand 2
A
6 9parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
63 66anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
31 35first strand
Strand 2
B
6 10parallel
Strand 3
B
57 60anti-parallel
Strand 4
B
63 66anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
31 34first strand
Strand 2
C
6 9parallel
Strand 3
C
57 60anti-parallel
Strand 4
C
63 66anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 35first strand
Strand 2
D
6 10parallel
Strand 3
D
57 60anti-parallel
Strand 4
D
63 66anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
31 34first strand
Strand 2
E
6 9parallel
Strand 3
E
57 60anti-parallel
Strand 4
E
63 66anti-parallel
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There are 4 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
31 34first strand
Strand 2
F
6 9parallel
Strand 3
F
57 60anti-parallel
Strand 4
F
63 66anti-parallel
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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
31 34first strand
Strand 2
G
6 9parallel
Strand 3
G
57 59anti-parallel
Strand 4
G
65 66anti-parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
31 35first strand
Strand 2
H
6 10parallel
Strand 3
H
57 60anti-parallel
Strand 4
H
63 66anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il