Analysis of interatomic Contacts of Structural Units in PDB entry:
2WWB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WWB entry

There are 15 chains in PDB entry 2WWB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 476
B
 MET 1GLY 68
C
 GLU 61SER 96
D
 A 41 G 103
E
 U 528 C 561
F
 C 1654 G 1678
G
 A 1917 U 1930
H
 MET 1SER 269
I
 MET 1LYS 153
J
 MET 1LYS 53
K
 LEU 57ILE 139
L
 MET 1GLU 127
M
 THR 9TYR 92
N
 MET 1LEU 69
O
 MET 1TYR 37
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 2WWB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
27 48Right-handed alpha
Helix 3
3
A
62 70Right-handed alpha
Helix 4
4
A
82 98Right-handed alpha
Helix 5
5
A
111 135Right-handed alpha
Helix 6
6
A
144 171Right-handed alpha
Helix 7
7
A
178 196Right-handed alpha
Helix 8
8
A
215 223Right-handed alpha
Helix 9
9
A
238 261Right-handed alpha
Helix 10
10
A
287 312Right-handed alpha
Helix 11
11
A
317 322Right-handed alpha
Helix 12
12
A
340 345Right-handed alpha
Helix 13
13
A
358 380Right-handed alpha
Helix 14
14
A
386 398Right-handed alpha
Helix 15
15
A
410 439Right-handed alpha
Helix 16
16
A
443 466Right-handed alpha
Helix 17
17
B
10 25Right-handed alpha
Helix 18
18
B
30 40Right-handed alpha
Helix 19
19
B
41 59Right-handed alpha
Helix 20
20
B
60 62Right-handed 310
Helix 21
21
C
72 88Right-handed alpha
Helix 22
22
H
23 27Right-handed 310
Helix 23
23
H
31 47Right-handed alpha
Helix 24
24
H
114 128Right-handed alpha
Helix 25
25
H
129 131Right-handed 310
Helix 26
26
H
133 139Right-handed alpha
Helix 27
27
H
153 158Right-handed 310
Helix 28
28
H
161 173Right-handed alpha
Helix 29
29
H
175 182Right-handed alpha
Helix 30
30
H
190 194Right-handed 310
Helix 31
31
H
234 239Right-handed alpha
Helix 32
32
H
253 260Right-handed alpha
Helix 33
33
I
10 12Right-handed 310
Helix 34
34
I
25 36Right-handed alpha
Helix 35
35
I
40 54Right-handed alpha
Helix 36
36
I
85 102Right-handed alpha
Helix 37
37
J
4 15Right-handed alpha
Helix 38
38
J
28 34Right-handed alpha
Helix 39
39
J
37 48Right-handed alpha
Helix 40
40
K
69 80Right-handed alpha
Helix 41
41
K
91 104Right-handed alpha
Helix 42
42
L
11 21Right-handed alpha
Helix 43
43
L
37 44Right-handed alpha
Helix 44
44
L
100 102Right-handed 310
Helix 45
45
L
112 120Right-handed alpha
Helix 46
46
M
16 21Right-handed alpha
Helix 47
47
M
27 45Right-handed alpha
Helix 48
48
M
52 61Right-handed alpha
Helix 49
49
N
6 11Right-handed alpha
Helix 50
50
N
14 31Right-handed alpha
Helix 51
51
N
41 66Right-handed alpha
Helix 52
52
O
6 20Right-handed alpha
Helix 53
53
O
25 31Right-handed alpha
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There are 8 sheets in PDB entry 2WWB. Click on sheet of interest to get list of strands forming it: HA, IA, IB, JA, KA, LA, LB, MA,

There are 3 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
226 229first strand
Strand 2
H
206 209parallel
Strand 3
H
248 249parallel
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There are 3 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
14 22first strand
Strand 2
I
144 151anti-parallel
Strand 3
I
114 120anti-parallel
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There are 2 strands in IB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
125 132first strand
Strand 2
I
135 141anti-parallel
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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
23 24first strand
Strand 2
J
50 51anti-parallel
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There are 4 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
63 66first strand
Strand 2
K
81 86anti-parallel
Strand 3
K
120 126anti-parallel
Strand 4
K
107 113anti-parallel
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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
32 34first strand
Strand 2
L
47 49anti-parallel
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There are 4 strands in LB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
79 82first strand
Strand 2
L
67 74anti-parallel
Strand 3
L
55 58anti-parallel
Strand 4
L
104 108anti-parallel
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There are 3 strands in MA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
10 14first strand
Strand 2
M
71 75anti-parallel
Strand 3
M
89 90anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il