Analysis of interatomic Contacts of Structural Units in PDB entry:
2X6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2X6L entry

There are 5 chains in PDB entry 2X6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 4ASN 69
B
SER 5ASN 69
C
GLY 4ASN 69
D
SER 5ASN 69
E
GLY 4ASN 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2X6L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
21 23Right-handed 310
Helix 2
2
A
56 69Right-handed alpha
Helix 3
3
B
21 23Right-handed 310
Helix 4
4
B
56 69Right-handed alpha
Helix 5
5
C
21 23Right-handed 310
Helix 6
6
C
56 69Right-handed alpha
Helix 7
7
D
21 23Right-handed 310
Helix 8
8
D
56 69Right-handed alpha
Helix 9
9
E
21 23Right-handed 310
Helix 10
10
E
56 68Right-handed alpha
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There are 7 sheets in PDB entry 2X6L. Click on sheet of interest to get list of strands forming it: AA, BA, BB, CA, CB, A, EA,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
25 30first strand
Strand 2
A
40 44anti-parallel
Strand 3
A
49 52anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
9 11first strand
Strand 2
D
9 11anti-parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 30first strand
Strand 2
B
40 44anti-parallel
Strand 3
B
49 52anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
9 11first strand
Strand 2
E
9 11anti-parallel
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There are 3 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
25 30first strand
Strand 2
C
40 44anti-parallel
Strand 3
C
49 52anti-parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
25 30first strand
Strand 2
D
40 44anti-parallel
Strand 3
D
49 52anti-parallel
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There are 3 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
25 30first strand
Strand 2
E
40 44anti-parallel
Strand 3
E
49 52anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il