Analysis of interatomic Contacts of Structural Units in PDB entry:
2YQ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2YQ6 entry

There are 4 chains in PDB entry 2YQ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -4GLY 196
B
 TRP 147ARG 153
B
 ILE 155ASP 157
B
 PHE 159ALA 164
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2YQ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-4 19Right-handed alpha
Helix 2
2
A
25 101Right-handed alpha
Helix 3
3
A
101 111Right-handed alpha
Helix 4
4
A
118 132Right-handed alpha
Helix 5
5
A
136 157Right-handed alpha
Helix 6
6
A
161 178Right-handed alpha
Helix 7
7
A
178 185Right-handed alpha
Helix 8
8
A
186 196Right-handed alpha
Helix 9
9
B
147 164Right-handed alpha
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There are no sheets in PDB entry 2YQ6
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il