Analysis of interatomic Contacts of Structural Units in PDB entry:
2Z5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Z5X entry

There is 1 chain in PDB entry 2Z5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 12LEU 524
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2Z5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 35Right-handed alpha
Helix 2
2
A
74 84Right-handed alpha
Helix 3
3
A
117 137Right-handed alpha
Helix 4
4
A
142 146Right-handed 310
Helix 5
5
A
148 155Right-handed alpha
Helix 6
6
A
156 165Right-handed alpha
Helix 7
7
A
167 183Right-handed alpha
Helix 8
8
A
190 200Right-handed alpha
Helix 9
9
A
203 209Right-handed alpha
Helix 10
10
A
223 235Right-handed alpha
Helix 11
11
A
274 279Right-handed alpha
Helix 12
12
A
288 297Right-handed alpha
Helix 13
13
A
313 318Right-handed alpha
Helix 14
14
A
355 362Right-handed alpha
Helix 15
15
A
365 382Right-handed alpha
Helix 16
16
A
383 388Right-handed 310
Helix 17
17
A
398 400Right-handed 310
Helix 18
18
A
414 420Right-handed alpha
Helix 19
19
A
421 423Right-handed 310
Helix 20
20
A
434 438Right-handed 310
Helix 21
21
A
444 463Right-handed alpha
Helix 22
22
A
467 471Right-handed 310
Helix 23
23
A
489 495Right-handed alpha
Helix 24
24
A
497 521Right-handed alpha
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There are 6 sheets in PDB entry 2Z5X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
39 42parallel
Strand 3
A
16 19parallel
Strand 4
A
268 271parallel
Strand 5
A
430 432parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
61 64anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
217 219anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 108first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
320 327parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 266first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
244 248anti-parallel
Strand 4
A
282 284parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
335 338first strand
Strand 2
A
348 354anti-parallel
Strand 3
A
303 309anti-parallel
Strand 4
A
391 396anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il