Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZJQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZJQ entry

There are 31 chains in PDB entry 2ZJQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
G 1 A 2877
Y
C 2 U 123
A
LEU 33THR 272
B
MET 1SER 205
C
ALA 2GLU 198
D
GLN 3LYS 179
E
GLY 5LYS 175
F
MET 1ALA 144
G
LYS 30LEU 171
H
MET 1LEU 134
I
HIS 4GLU 144
J
LYS 6ALA 141
K
HIS 3LEU 115
L
ARG 8GLY 111
M
GLN 2GLU 109
N
PRO 2GLN 118
O
ILE 5ILE 98
P
PHE 8LYS 134
Q
SER 2GLN 94
R
PRO 4THR 113
S
MET 1ARG 175
T
ALA 2GLN 85
U
THR 8GLU 79
V
MET 1GLN 66
W
MET 1GLU 55
Z
ALA 2ALA 59
1
ALA 2LYS 54
2
MET 1ASP 46
3
PRO 2ARG 64
4
MET 1GLY 37
5
GLU 52LYS 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 2ZJQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
211 215Right-handed 310
Helix 2
2
A
261 266Right-handed alpha
Helix 3
3
B
60 69Right-handed alpha
Helix 4
4
B
115 120Right-handed alpha
Helix 5
5
C
23 39Right-handed alpha
Helix 6
6
C
96 113Right-handed alpha
Helix 7
7
C
130 139Right-handed alpha
Helix 8
8
C
154 159Right-handed alpha
Helix 9
9
C
176 183Right-handed alpha
Helix 10
10
D
5 12Right-handed alpha
Helix 11
11
D
12 18Right-handed alpha
Helix 12
12
D
48 62Right-handed alpha
Helix 13
13
D
92 106Right-handed alpha
Helix 14
14
D
162 174Right-handed alpha
Helix 15
15
E
61 82Right-handed alpha
Helix 16
16
E
137 150Right-handed alpha
Helix 17
17
F
24 29Right-handed alpha
Helix 18
18
F
34 43Right-handed alpha
Helix 19
19
F
73 82Right-handed alpha
Helix 20
20
F
101 106Right-handed alpha
Helix 21
21
F
106 111Right-handed alpha
Helix 22
22
F
124 133Right-handed alpha
Helix 23
23
G
50 65Right-handed alpha
Helix 24
24
G
122 132Right-handed alpha
Helix 25
25
G
138 144Right-handed alpha
Helix 26
26
G
155 161Right-handed 310
Helix 27
27
H
116 121Right-handed alpha
Helix 28
28
H
123 128Right-handed alpha
Helix 29
29
I
11 15Right-handed 310
Helix 30
30
I
93 99Right-handed alpha
Helix 31
31
I
126 131Right-handed alpha
Helix 32
32
I
133 137Right-handed 310
Helix 33
33
J
45 59Right-handed alpha
Helix 34
34
J
117 124Right-handed alpha
Helix 35
35
K
15 32Right-handed alpha
Helix 36
36
K
38 56Right-handed alpha
Helix 37
37
K
59 67Right-handed alpha
Helix 38
38
K
68 70Right-handed 310
Helix 39
39
K
72 82Right-handed alpha
Helix 40
40
L
9 19Right-handed alpha
Helix 41
41
L
67 81Right-handed alpha
Helix 42
42
L
98 111Right-handed alpha
Helix 43
43
M
8 16Right-handed alpha
Helix 44
44
M
60 63Right-handed 310
Helix 45
45
M
104 108Right-handed 310
Helix 46
46
N
8 19Right-handed alpha
Helix 47
47
N
25 29Right-handed 310
Helix 48
48
N
33 68Right-handed alpha
Helix 49
49
N
69 72Right-handed 310
Helix 50
50
N
75 86Right-handed alpha
Helix 51
51
N
94 101Right-handed alpha
Helix 52
52
N
102 115Right-handed alpha
Helix 53
53
P
13 18Right-handed alpha
Helix 54
54
P
34 46Right-handed alpha
Helix 55
55
P
49 60Right-handed alpha
Helix 56
56
P
64 81Right-handed alpha
Helix 57
57
P
82 84Right-handed 310
Helix 58
58
Q
13 21Right-handed alpha
Helix 59
59
Q
34 47Right-handed alpha
Helix 60
60
S
10 15Right-handed alpha
Helix 61
61
S
35 47Right-handed alpha
Helix 62
62
U
63 72Right-handed alpha
Helix 63
63
V
11 17Right-handed alpha
Helix 64
64
V
20 35Right-handed alpha
Helix 65
65
V
39 61Right-handed alpha
Helix 66
66
W
13 23Right-handed alpha
Helix 67
67
W
37 47Right-handed alpha
Helix 68
68
W
48 51Right-handed 310
Helix 69
69
Z
14 21Right-handed alpha
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There are 40 sheets in PDB entry 2ZJQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
77 83first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
102 106anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
182 186first strand
Strand 2
A
172 176anti-parallel
Strand 3
A
163 168anti-parallel
Strand 4
A
141 143anti-parallel
Strand 5
A
192 193anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 16first strand
Strand 2
B
19 27anti-parallel
Strand 3
B
181 185anti-parallel
Strand 4
B
167 176anti-parallel
Strand 5
B
101 104anti-parallel
Strand 6
B
195 200anti-parallel
Strand 7
B
3 16anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
78 82first strand
Strand 2
B
46 50anti-parallel
Strand 3
B
31 37anti-parallel
Strand 4
B
89 90anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
113 114first strand
Strand 2
B
158 159anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
167 170first strand
Strand 2
C
148 151parallel
Strand 3
C
185 187parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 37first strand
Strand 2
D
153 158anti-parallel
Strand 3
D
128 130anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
17 18first strand
Strand 2
E
23 26anti-parallel
Strand 3
E
34 36anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
42 45first strand
Strand 2
E
50 53anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
83 85first strand
Strand 2
E
132 135anti-parallel
Strand 3
E
121 124anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
103 104first strand
Strand 2
E
114 115anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
8 12first strand
Strand 2
F
53 59anti-parallel
Strand 3
F
65 66anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
41 45first strand
Strand 2
G
79 83parallel
Strand 3
G
148 150parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
99 102first strand
Strand 2
G
112 115anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
7 10first strand
Strand 2
H
16 24anti-parallel
Strand 3
H
50 58anti-parallel
Strand 4
H
69 76anti-parallel
Strand 5
H
95 98anti-parallel
Strand 6
H
7 10parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
81 82first strand
Strand 2
H
88 91anti-parallel
Strand 3
M
75 82anti-parallel
Strand 4
M
65 72anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
74 76first strand
Strand 2
I
107 109parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
102 105first strand
Strand 2
J
34 37anti-parallel
Strand 3
J
130 133anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
74 75first strand
Strand 2
J
93 94anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
33 37first strand
Strand 2
K
110 114anti-parallel
Strand 3
K
96 97anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
27 29first strand
Strand 2
L
42 44anti-parallel
Strand 3
L
49 50anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
31 32first strand
Strand 2
M
93 95anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
M
35 36first strand
Strand 2
M
88 90anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
17 21first strand
Strand 2
O
89 95anti-parallel
Strand 3
O
56 65anti-parallel
Strand 4
O
31 34anti-parallel
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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
39 40first strand
Strand 2
O
45 46anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
71 74first strand
Strand 2
O
81 84anti-parallel
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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
25 31first strand
Strand 2
P
120 130anti-parallel
Strand 3
P
90 102anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
105 108first strand
Strand 2
P
114 117anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
9 10first strand
Strand 2
Q
24 28anti-parallel
Strand 3
Q
77 81anti-parallel
Strand 4
Q
52 55anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
21 23first strand
Strand 2
R
33 40anti-parallel
Strand 3
R
45 48anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
53 55first strand
Strand 2
R
70 72anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
21 24first strand
Strand 2
S
78 84parallel
Strand 3
S
66 71anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
93 97first strand
Strand 2
S
119 123anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
146 148first strand
Strand 2
S
167 170anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
36 38first strand
Strand 2
T
59 61anti-parallel
Strand 3
T
51 52anti-parallel
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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
46 47first strand
Strand 2
T
76 81parallel
Strand 3
T
67 72anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
23 24first strand
Strand 2
U
36 37anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
2 3first strand
Strand 2
W
32 33anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
30 32first strand
Strand 2
Z
39 41anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
4
2 3first strand
Strand 2
4
34 35parallel
Strand 3
4
22 26anti-parallel
Strand 4
4
15 19anti-parallel
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