Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZNC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2ZNC entry

There is 1 chain in PDB entry 2ZNC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TRP 5ALA 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 2ZNC. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
8 11Right-handed 310
Helix 2
2
A
13 15Right-handed 310
Helix 3
3
A
21 24Right-handed 310
Helix 4
4
A
35 37Right-handed 310
Helix 5
5
A
155 166Right-handed 310
Helix 6
6
A
182 184Right-handed 310
Helix 7
7
A
187 188Right-handed 310
Helix 8
8
A
220 228Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2ZNC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 50first strand
Strand 2
A
78 80anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
173 176first strand
Strand 2
A
57 61anti-parallel
Strand 3
A
66 68anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
191 196first strand
Strand 2
A
207 212anti-parallel
Strand 3
A
141 148parallel
Strand 4
A
116 124anti-parallel
Strand 5
A
88 97anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
148 151first strand
Strand 2
A
216 219parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il