Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2ZVW entry

There are 16 chains in PDB entry 2ZVW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ILE 255
B	MET 1	ILE 255
C	MET 1	ILE 255
D	MET 1	ILE 255
E	MET 1	ILE 255
F	MET 1	ILE 255
G	MET 1	ILE 255
H	MET 1	ILE 255
I	ARG 143	SER 153
J	ARG 143	SER 153
K	ARG 143	SER 153
L	ARG 143	SER 153
M	ARG 143	SER 153
N	ARG 143	SER 153
O	ARG 143	SER 153
P	ARG 143	SER 153

There are 61 helices in PDB entry 2ZVW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	23	Right-handed alpha
Helix 2	2	A	55	57	Right-handed 310
Helix 3	3	A	72	81	Right-handed alpha
Helix 4	4	A	141	152	Right-handed alpha
Helix 5	5	A	190	194	Right-handed 310
Helix 6	6	A	209	216	Right-handed alpha
Helix 7	7	A	217	222	Right-handed 310
Helix 8	8	B	8	21	Right-handed alpha
Helix 9	9	B	55	57	Right-handed 310
Helix 10	10	B	72	80	Right-handed alpha
Helix 11	11	B	141	153	Right-handed alpha
Helix 12	12	B	209	216	Right-handed alpha
Helix 13	13	B	217	222	Right-handed 310
Helix 14	14	C	8	20	Right-handed alpha
Helix 15	15	C	55	57	Right-handed 310
Helix 16	16	C	72	80	Right-handed alpha
Helix 17	17	C	141	153	Right-handed alpha
Helix 18	18	C	209	216	Right-handed alpha
Helix 19	19	C	217	222	Right-handed 310
Helix 20	20	D	8	20	Right-handed alpha
Helix 21	21	D	55	57	Right-handed 310
Helix 22	22	D	72	80	Right-handed alpha
Helix 23	23	D	141	152	Right-handed alpha
Helix 24	24	D	190	194	Right-handed 310
Helix 25	25	D	209	216	Right-handed alpha
Helix 26	26	D	217	222	Right-handed 310
Helix 27	27	E	9	20	Right-handed alpha
Helix 28	28	E	55	57	Right-handed 310
Helix 29	29	E	72	80	Right-handed alpha
Helix 30	30	E	141	152	Right-handed alpha
Helix 31	31	E	190	194	Right-handed 310
Helix 32	32	E	209	216	Right-handed alpha
Helix 33	33	E	217	222	Right-handed 310
Helix 34	34	F	9	20	Right-handed alpha
Helix 35	35	F	55	57	Right-handed 310
Helix 36	36	F	72	80	Right-handed alpha
Helix 37	37	F	141	153	Right-handed alpha
Helix 38	38	F	190	194	Right-handed 310
Helix 39	39	F	209	216	Right-handed alpha
Helix 40	40	F	217	222	Right-handed 310
Helix 41	41	G	9	21	Right-handed alpha
Helix 42	42	G	54	57	Right-handed 310
Helix 43	43	G	72	80	Right-handed alpha
Helix 44	44	G	141	153	Right-handed alpha
Helix 45	45	G	209	216	Right-handed alpha
Helix 46	46	G	217	222	Right-handed 310
Helix 47	47	H	8	20	Right-handed alpha
Helix 48	48	H	55	57	Right-handed 310
Helix 49	49	H	72	80	Right-handed alpha
Helix 50	50	H	141	153	Right-handed alpha
Helix 51	51	H	190	194	Right-handed 310
Helix 52	52	H	209	216	Right-handed alpha
Helix 53	53	H	217	222	Right-handed 310
Helix 54	54	I	146	150	Right-handed 310
Helix 55	55	J	146	150	Right-handed 310
Helix 56	56	K	146	150	Right-handed 310
Helix 57	57	L	146	150	Right-handed 310
Helix 58	58	M	146	150	Right-handed 310
Helix 59	59	N	146	150	Right-handed 310
Helix 60	60	O	146	150	Right-handed 310
Helix 61	61	P	146	150	Right-handed 310

There are 20 sheets in PDB entry 2ZVW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	62	first strand
Strand 2	A	2	6	anti-parallel
Strand 3	A	87	92	anti-parallel
Strand 4	A	98	104	anti-parallel
Strand 5	A	110	117	anti-parallel
Strand 6	B	176	182	anti-parallel
Strand 7	B	166	173	anti-parallel
Strand 8	B	157	163	anti-parallel
Strand 9	B	203	208	anti-parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	66	71	first strand
Strand 2	A	25	30	anti-parallel
Strand 3	A	34	40	anti-parallel
Strand 4	A	46	53	anti-parallel
Strand 5	A	245	251	anti-parallel
Strand 6	A	235	241	anti-parallel
Strand 7	A	224	229	anti-parallel
Strand 8	A	135	140	anti-parallel
Strand 9	A	196	199	anti-parallel

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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	208	first strand
Strand 2	A	157	163	anti-parallel
Strand 3	A	166	173	anti-parallel
Strand 4	A	176	182	anti-parallel
Strand 5	C	110	117	anti-parallel
Strand 6	C	98	104	anti-parallel
Strand 7	C	87	92	anti-parallel
Strand 8	C	2	6	anti-parallel
Strand 9	C	59	62	anti-parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	59	62	first strand
Strand 2	B	2	6	anti-parallel
Strand 3	B	87	92	anti-parallel
Strand 4	B	98	104	anti-parallel
Strand 5	B	110	117	anti-parallel
Strand 6	C	176	182	anti-parallel
Strand 7	C	166	173	anti-parallel
Strand 8	C	157	163	anti-parallel
Strand 9	C	203	208	anti-parallel

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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	66	71	first strand
Strand 2	B	25	31	anti-parallel
Strand 3	B	34	40	anti-parallel
Strand 4	B	46	53	anti-parallel
Strand 5	B	245	251	anti-parallel
Strand 6	B	235	241	anti-parallel
Strand 7	B	224	229	anti-parallel
Strand 8	B	135	140	anti-parallel
Strand 9	B	196	199	anti-parallel

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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	66	71	first strand
Strand 2	C	25	30	anti-parallel
Strand 3	C	34	40	anti-parallel
Strand 4	C	46	53	anti-parallel
Strand 5	C	245	251	anti-parallel
Strand 6	C	235	241	anti-parallel
Strand 7	C	224	229	anti-parallel
Strand 8	C	135	140	anti-parallel
Strand 9	C	196	199	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	122	first strand
Strand 2	G	120	121	parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	59	62	first strand
Strand 2	D	2	6	anti-parallel
Strand 3	D	87	92	anti-parallel
Strand 4	D	98	104	anti-parallel
Strand 5	D	110	117	anti-parallel
Strand 6	E	176	182	anti-parallel
Strand 7	E	166	173	anti-parallel
Strand 8	E	157	163	anti-parallel
Strand 9	E	203	208	anti-parallel

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There are 9 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	66	71	first strand
Strand 2	D	25	30	anti-parallel
Strand 3	D	34	40	anti-parallel
Strand 4	D	46	53	anti-parallel
Strand 5	D	245	251	anti-parallel
Strand 6	D	235	241	anti-parallel
Strand 7	D	224	229	anti-parallel
Strand 8	D	135	140	anti-parallel
Strand 9	D	196	199	anti-parallel

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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	208	first strand
Strand 2	D	157	163	anti-parallel
Strand 3	D	166	173	anti-parallel
Strand 4	D	176	182	anti-parallel
Strand 5	F	110	117	anti-parallel
Strand 6	F	98	104	anti-parallel
Strand 7	F	87	92	anti-parallel
Strand 8	F	2	6	anti-parallel
Strand 9	F	59	62	anti-parallel

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There are 9 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	62	first strand
Strand 2	E	2	6	anti-parallel
Strand 3	E	87	92	anti-parallel
Strand 4	E	98	104	anti-parallel
Strand 5	E	110	117	anti-parallel
Strand 6	F	176	182	anti-parallel
Strand 7	F	166	173	anti-parallel
Strand 8	F	157	163	anti-parallel
Strand 9	F	203	208	anti-parallel

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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	66	71	first strand
Strand 2	E	25	30	anti-parallel
Strand 3	E	34	40	anti-parallel
Strand 4	E	46	53	anti-parallel
Strand 5	E	245	251	anti-parallel
Strand 6	E	235	241	anti-parallel
Strand 7	E	224	229	anti-parallel
Strand 8	E	135	140	anti-parallel
Strand 9	E	196	199	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	120	121	first strand
Strand 2	H	121	122	parallel

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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	66	71	first strand
Strand 2	F	25	30	anti-parallel
Strand 3	F	34	40	anti-parallel
Strand 4	F	46	53	anti-parallel
Strand 5	F	245	251	anti-parallel
Strand 6	F	235	241	anti-parallel
Strand 7	F	224	229	anti-parallel
Strand 8	F	135	140	anti-parallel
Strand 9	F	196	199	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	59	61	first strand
Strand 2	G	2	6	anti-parallel
Strand 3	G	87	92	anti-parallel
Strand 4	G	98	104	anti-parallel
Strand 5	G	111	117	anti-parallel

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There are 9 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	66	71	first strand
Strand 2	G	25	30	anti-parallel
Strand 3	G	35	40	anti-parallel
Strand 4	G	46	52	anti-parallel
Strand 5	G	245	251	anti-parallel
Strand 6	G	235	241	anti-parallel
Strand 7	G	224	229	anti-parallel
Strand 8	G	135	140	anti-parallel
Strand 9	G	196	199	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	182	first strand
Strand 2	G	166	173	anti-parallel
Strand 3	G	157	163	anti-parallel
Strand 4	G	203	208	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	62	first strand
Strand 2	H	2	6	anti-parallel
Strand 3	H	87	92	anti-parallel
Strand 4	H	98	104	anti-parallel
Strand 5	H	111	117	anti-parallel

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There are 9 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	71	first strand
Strand 2	H	25	30	anti-parallel
Strand 3	H	34	40	anti-parallel
Strand 4	H	46	53	anti-parallel
Strand 5	H	245	251	anti-parallel
Strand 6	H	235	240	anti-parallel
Strand 7	H	224	229	anti-parallel
Strand 8	H	135	140	anti-parallel
Strand 9	H	196	199	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	176	182	first strand
Strand 2	H	166	173	anti-parallel
Strand 3	H	157	163	anti-parallel
Strand 4	H	203	208	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2ZVW

Analysis of interatomic Contacts of Structural Units in PDB entry:
2ZVW