Analysis of interatomic Contacts of Structural Units in PDB entry:
3AU5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3AU5 entry

There are 2 chains in PDB entry 3AU5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 1501THR 2048
B
ILE 1502THR 2048
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3AU5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1504 1515Right-handed alpha
Helix 2
2
A
1519 1529Right-handed alpha
Helix 3
3
A
1530 1534Right-handed 310
Helix 4
4
A
1553 1560Right-handed alpha
Helix 5
5
A
1564 1576Right-handed alpha
Helix 6
6
A
1585 1599Right-handed alpha
Helix 7
7
A
1601 1614Right-handed alpha
Helix 8
8
A
1622 1637Right-handed alpha
Helix 9
9
A
1642 1660Right-handed alpha
Helix 10
10
A
1663 1677Right-handed alpha
Helix 11
11
A
1687 1696Right-handed alpha
Helix 12
12
A
1721 1733Right-handed alpha
Helix 13
13
A
1760 1774Right-handed alpha
Helix 14
14
A
1801 1816Right-handed alpha
Helix 15
15
A
1823 1840Right-handed alpha
Helix 16
16
A
1850 1854Right-handed 310
Helix 17
17
A
1857 1863Right-handed alpha
Helix 18
18
A
1913 1930Right-handed alpha
Helix 19
19
A
1935 1948Right-handed alpha
Helix 20
20
A
2025 2047Right-handed alpha
Helix 21
21
B
1504 1515Right-handed alpha
Helix 22
22
B
1519 1530Right-handed alpha
Helix 23
23
B
1531 1534Right-handed 310
Helix 24
24
B
1564 1578Right-handed alpha
Helix 25
25
B
1585 1599Right-handed alpha
Helix 26
26
B
1601 1614Right-handed alpha
Helix 27
27
B
1622 1636Right-handed alpha
Helix 28
28
B
1642 1660Right-handed alpha
Helix 29
29
B
1663 1679Right-handed alpha
Helix 30
30
B
1687 1696Right-handed alpha
Helix 31
31
B
1721 1731Right-handed alpha
Helix 32
32
B
1760 1772Right-handed alpha
Helix 33
33
B
1801 1817Right-handed alpha
Helix 34
34
B
1823 1840Right-handed alpha
Helix 35
35
B
1850 1854Right-handed 310
Helix 36
36
B
1911 1930Right-handed alpha
Helix 37
37
B
1935 1948Right-handed alpha
Helix 38
38
B
1997 1999Right-handed 310
Helix 39
39
B
2025 2046Right-handed alpha
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There are 4 sheets in PDB entry 3AU5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1710 1716first strand
Strand 2
A
1700 1706anti-parallel
Strand 3
A
1783 1790parallel
Strand 4
A
1741 1747anti-parallel
Strand 5
A
1752 1754anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1992 1995first strand
Strand 2
A
1979 1984anti-parallel
Strand 3
A
1970 1976anti-parallel
Strand 4
A
1956 1964anti-parallel
Strand 5
A
2017 2022anti-parallel
Strand 6
A
2009 2014anti-parallel
Strand 7
A
1999 2006anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1710 1716first strand
Strand 2
B
1700 1706anti-parallel
Strand 3
B
1783 1790parallel
Strand 4
B
1741 1747anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1992 1995first strand
Strand 2
B
1979 1983anti-parallel
Strand 3
B
1970 1975anti-parallel
Strand 4
B
1956 1962anti-parallel
Strand 5
B
2019 2022anti-parallel
Strand 6
B
2009 2013anti-parallel
Strand 7
B
2001 2006anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il