Analysis of interatomic Contacts of Structural Units in PDB entry:
3B93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B93 entry

There are 3 chains in PDB entry 3B93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 55SER 177
B
PRO 57SER 177
C
PRO 57ILE 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3B93


There are 8 sheets in PDB entry 3B93. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 72first strand
Strand 2
A
59 62anti-parallel
Strand 3
A
164 171anti-parallel
Strand 4
A
93 101anti-parallel
Strand 5
A
134 135anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 72first strand
Strand 2
A
59 62anti-parallel
Strand 3
A
164 171anti-parallel
Strand 4
A
93 101anti-parallel
Strand 5
A
138 142anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 83first strand
Strand 2
A
86 89anti-parallel
Strand 3
A
147 152anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
122 127anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 71first strand
Strand 2
B
59 62anti-parallel
Strand 3
B
164 171anti-parallel
Strand 4
B
93 101anti-parallel
Strand 5
B
134 135anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
69 71first strand
Strand 2
B
59 62anti-parallel
Strand 3
B
164 171anti-parallel
Strand 4
B
93 101anti-parallel
Strand 5
B
138 142anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
79 83first strand
Strand 2
B
86 89anti-parallel
Strand 3
B
147 151anti-parallel
Strand 4
B
116 119anti-parallel
Strand 5
B
122 126anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
69 72first strand
Strand 2
C
59 62anti-parallel
Strand 3
C
147 171anti-parallel
Strand 4
C
93 119anti-parallel
Strand 5
C
122 125anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
79 81first strand
Strand 2
C
87 89anti-parallel
Strand 3
C
147 171anti-parallel
Strand 4
C
93 119anti-parallel
Strand 5
C
138 142anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il