Analysis of interatomic Contacts of Structural Units in PDB entry:
3B94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3B94 entry

There are 4 chains in PDB entry 3B94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 56PHE 175
B
 PRO 57PHE 175
C
 PRO 57ILE 176
D
 GLU 56PHE 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3B94

There are 8 sheets in PDB entry 3B94. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
59 62anti-parallel
Strand 3
A
164 171anti-parallel
Strand 4
A
93 100anti-parallel
Strand 5
A
138 142anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 83first strand
Strand 2
A
86 89anti-parallel
Strand 3
A
147 152anti-parallel
Strand 4
A
115 119anti-parallel
Strand 5
A
122 126anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 71first strand
Strand 2
B
59 62anti-parallel
Strand 3
B
164 171anti-parallel
Strand 4
B
93 101anti-parallel
Strand 5
B
134 142anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 83first strand
Strand 2
B
86 89anti-parallel
Strand 3
B
147 152anti-parallel
Strand 4
B
115 119anti-parallel
Strand 5
B
122 127anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
164 171anti-parallel
Strand 3
C
93 100anti-parallel
Strand 4
C
138 142anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 83first strand
Strand 2
C
86 89anti-parallel
Strand 3
C
147 152anti-parallel
Strand 4
C
115 119anti-parallel
Strand 5
C
122 127anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
69 72first strand
Strand 2
D
59 62anti-parallel
Strand 3
D
164 171anti-parallel
Strand 4
D
93 101anti-parallel
Strand 5
D
134 142anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
79 83first strand
Strand 2
D
86 89anti-parallel
Strand 3
D
147 150anti-parallel
Strand 4
D
117 119anti-parallel
Strand 5
D
122 125anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il