Analysis of interatomic Contacts of Structural Units in PDB entry:
3BIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BIC entry

There are 2 chains in PDB entry 3BIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 27LYS 745
B
 PRO 38GLN 757
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 3BIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 34Right-handed alpha
Helix 2
2
A
40 51Right-handed alpha
Helix 3
3
A
55 60Right-handed 310
Helix 4
4
A
74 79Right-handed 310
Helix 5
5
A
115 128Right-handed alpha
Helix 6
6
A
139 144Right-handed alpha
Helix 7
7
A
150 154Right-handed 310
Helix 8
8
A
166 174Right-handed alpha
Helix 9
9
A
191 205Right-handed alpha
Helix 10
10
A
209 213Right-handed 310
Helix 11
11
A
221 227Right-handed alpha
Helix 12
12
A
234 253Right-handed alpha
Helix 13
13
A
263 269Right-handed alpha
Helix 14
14
A
272 294Right-handed alpha
Helix 15
15
A
297 302Right-handed alpha
Helix 16
16
A
314 338Right-handed alpha
Helix 17
17
A
341 346Right-handed 310
Helix 18
18
A
364 380Right-handed alpha
Helix 19
19
A
398 415Right-handed alpha
Helix 20
20
A
417 421Right-handed 310
Helix 21
21
A
428 453Right-handed alpha
Helix 22
22
A
454 462Right-handed alpha
Helix 23
23
A
462 481Right-handed alpha
Helix 24
24
A
507 525Right-handed alpha
Helix 25
25
A
526 544Right-handed alpha
Helix 26
26
A
547 558Right-handed alpha
Helix 27
27
A
561 574Right-handed alpha
Helix 28
28
A
585 592Right-handed alpha
Helix 29
29
A
594 612Right-handed alpha
Helix 30
30
A
628 641Right-handed alpha
Helix 31
31
A
653 665Right-handed alpha
Helix 32
32
A
676 693Right-handed alpha
Helix 33
33
A
706 708Right-handed 310
Helix 34
34
A
709 717Right-handed alpha
Helix 35
35
A
727 745Right-handed alpha
Helix 36
36
B
40 51Right-handed alpha
Helix 37
37
B
55 60Right-handed 310
Helix 38
38
B
74 79Right-handed 310
Helix 39
39
B
115 128Right-handed alpha
Helix 40
40
B
139 144Right-handed alpha
Helix 41
41
B
150 154Right-handed 310
Helix 42
42
B
166 174Right-handed alpha
Helix 43
43
B
191 205Right-handed alpha
Helix 44
44
B
209 213Right-handed 310
Helix 45
45
B
221 227Right-handed alpha
Helix 46
46
B
234 253Right-handed alpha
Helix 47
47
B
263 269Right-handed alpha
Helix 48
48
B
272 294Right-handed alpha
Helix 49
49
B
297 302Right-handed alpha
Helix 50
50
B
314 338Right-handed alpha
Helix 51
51
B
341 346Right-handed 310
Helix 52
52
B
355 358Right-handed 310
Helix 53
53
B
364 380Right-handed alpha
Helix 54
54
B
398 415Right-handed alpha
Helix 55
55
B
417 421Right-handed 310
Helix 56
56
B
428 453Right-handed alpha
Helix 57
57
B
454 462Right-handed alpha
Helix 58
58
B
462 481Right-handed alpha
Helix 59
59
B
507 525Right-handed alpha
Helix 60
60
B
526 544Right-handed alpha
Helix 61
61
B
547 558Right-handed alpha
Helix 62
62
B
561 574Right-handed alpha
Helix 63
63
B
585 592Right-handed alpha
Helix 64
64
B
594 610Right-handed alpha
Helix 65
65
B
628 641Right-handed alpha
Helix 66
66
B
653 665Right-handed alpha
Helix 67
67
B
680 692Right-handed alpha
Helix 68
68
B
706 708Right-handed 310
Helix 69
69
B
709 717Right-handed alpha
Helix 70
70
B
727 747Right-handed alpha
Helix 71
71
B
751 756Right-handed alpha
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There are 8 sheets in PDB entry 3BIC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
68 69anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
384 386parallel
Strand 3
A
349 353parallel
Strand 4
A
305 311parallel
Strand 5
A
259 262parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
183 186parallel
Strand 3
A
214 217parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
644 647first strand
Strand 2
A
616 621parallel
Strand 3
A
668 673parallel
Strand 4
A
698 703parallel
Strand 5
A
720 722parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
68 69anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
384 386parallel
Strand 3
B
349 353parallel
Strand 4
B
305 311parallel
Strand 5
B
259 262parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
183 186parallel
Strand 3
B
214 217parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
644 647first strand
Strand 2
B
616 621parallel
Strand 3
B
668 673parallel
Strand 4
B
698 703parallel
Strand 5
B
720 722parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il