Analysis of interatomic Contacts of Structural Units in PDB entry:
3BKL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3BKL entry

There is 1 chain in PDB entry 3BKL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 40ASN 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 3BKL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 71Right-handed alpha
Helix 2
2
A
74 100Right-handed alpha
Helix 3
3
A
101 102Right-handed 310
Helix 4
4
A
103 107Right-handed 310
Helix 5
5
A
109 120Right-handed alpha
Helix 6
6
A
122 127Right-handed 310
Helix 7
7
A
128 149Right-handed alpha
Helix 8
8
A
163 172Right-handed alpha
Helix 9
9
A
174 189Right-handed alpha
Helix 10
10
A
189 194Right-handed alpha
Helix 11
11
A
196 211Right-handed alpha
Helix 12
12
A
215 222Right-handed alpha
Helix 13
13
A
223 225Right-handed 310
Helix 14
14
A
228 240Right-handed alpha
Helix 15
15
A
240 260Right-handed alpha
Helix 16
16
A
283 285Right-handed 310
Helix 17
17
A
286 291Right-handed alpha
Helix 18
18
A
300 308Right-handed alpha
Helix 19
19
A
311 326Right-handed alpha
Helix 20
20
A
332 339Right-handed alpha
Helix 21
21
A
374 394Right-handed alpha
Helix 22
22
A
398 402Right-handed 310
Helix 23
23
A
406 423Right-handed alpha
Helix 24
24
A
423 430Right-handed alpha
Helix 25
25
A
439 455Right-handed alpha
Helix 26
26
A
456 473Right-handed alpha
Helix 27
27
A
477 479Right-handed 310
Helix 28
28
A
480 494Right-handed alpha
Helix 29
29
A
506 511Right-handed 310
Helix 30
30
A
512 517Right-handed alpha
Helix 31
31
A
520 541Right-handed alpha
Helix 32
32
A
546 550Right-handed 310
Helix 33
33
A
555 568Right-handed alpha
Helix 34
34
A
573 583Right-handed alpha
Helix 35
35
A
589 610Right-handed alpha
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There are 3 sheets in PDB entry 3BKL. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
158 160anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
495 496parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 358first strand
Strand 2
A
365 368anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il