Analysis of interatomic Contacts of Structural Units in PDB entry:
3C0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C0G entry

There are 2 chains in PDB entry 3C0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6GLY 322
B
 ASP 5PRO 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3C0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 11Right-handed alpha
Helix 2
2
A
45 51Right-handed alpha
Helix 3
3
A
55 69Right-handed alpha
Helix 4
4
A
98 110Right-handed alpha
Helix 5
5
A
114 135Right-handed alpha
Helix 6
6
A
143 145Right-handed 310
Helix 7
7
A
187 192Right-handed alpha
Helix 8
8
A
198 215Right-handed alpha
Helix 9
9
A
222 233Right-handed alpha
Helix 10
10
A
238 243Right-handed alpha
Helix 11
11
A
246 257Right-handed alpha
Helix 12
12
A
266 271Right-handed alpha
Helix 13
13
A
273 278Right-handed alpha
Helix 14
14
A
278 283Right-handed alpha
Helix 15
15
A
288 303Right-handed alpha
Helix 16
16
A
308 313Right-handed alpha
Helix 17
17
B
7 10Right-handed 310
Helix 18
18
B
45 51Right-handed alpha
Helix 19
19
B
55 69Right-handed alpha
Helix 20
20
B
98 109Right-handed alpha
Helix 21
21
B
114 135Right-handed alpha
Helix 22
22
B
143 145Right-handed 310
Helix 23
23
B
182 186Right-handed 310
Helix 24
24
B
187 192Right-handed alpha
Helix 25
25
B
198 215Right-handed alpha
Helix 26
26
B
222 233Right-handed alpha
Helix 27
27
B
238 243Right-handed alpha
Helix 28
28
B
246 257Right-handed alpha
Helix 29
29
B
266 271Right-handed alpha
Helix 30
30
B
273 278Right-handed alpha
Helix 31
31
B
278 283Right-handed alpha
Helix 32
32
B
288 303Right-handed alpha
Helix 33
33
B
305 313Right-handed alpha
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There are 8 sheets in PDB entry 3C0G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 20first strand
Strand 2
A
24 31anti-parallel
Strand 3
A
37 44anti-parallel
Strand 4
A
86 92anti-parallel
Strand 5
A
77 83anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
167 168anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
158 160anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
196 197anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 20first strand
Strand 2
B
24 31anti-parallel
Strand 3
B
37 44anti-parallel
Strand 4
B
86 92anti-parallel
Strand 5
B
77 83anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
167 168anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 149first strand
Strand 2
B
158 160anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 175first strand
Strand 2
B
196 197anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il