Analysis of interatomic Contacts of Structural Units in PDB entry:
3C0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3C0Y entry

There are 3 chains in PDB entry 3C0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 515ARG 900
B
 PRO 517LEU 901
C
 THR 519GLN 899
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 58 helices in PDB entry 3C0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
525 531Right-handed 310
Helix 2
2
A
537 541Right-handed 310
Helix 3
3
A
545 558Right-handed alpha
Helix 4
4
A
560 564Right-handed 310
Helix 5
5
A
573 578Right-handed alpha
Helix 6
6
A
582 591Right-handed alpha
Helix 7
7
A
600 610Right-handed alpha
Helix 8
8
A
633 655Right-handed alpha
Helix 9
9
A
683 695Right-handed alpha
Helix 10
10
A
711 719Right-handed alpha
Helix 11
11
A
749 753Right-handed 310
Helix 12
12
A
770 781Right-handed alpha
Helix 13
13
A
781 790Right-handed alpha
Helix 14
14
A
807 811Right-handed 310
Helix 15
15
A
816 829Right-handed alpha
Helix 16
16
A
830 833Right-handed 310
Helix 17
17
A
844 860Right-handed alpha
Helix 18
18
A
865 874Right-handed 310
Helix 19
19
A
877 892Right-handed alpha
Helix 20
20
A
893 894Right-handed 310
Helix 21
21
A
895 899Right-handed 310
Helix 22
22
B
525 530Right-handed 310
Helix 23
23
B
545 558Right-handed alpha
Helix 24
24
B
560 564Right-handed 310
Helix 25
25
B
573 579Right-handed alpha
Helix 26
26
B
582 591Right-handed alpha
Helix 27
27
B
633 654Right-handed alpha
Helix 28
28
B
683 695Right-handed alpha
Helix 29
29
B
711 719Right-handed alpha
Helix 30
30
B
733 736Right-handed 310
Helix 31
31
B
749 753Right-handed 310
Helix 32
32
B
770 781Right-handed alpha
Helix 33
33
B
781 790Right-handed alpha
Helix 34
34
B
816 828Right-handed alpha
Helix 35
35
B
830 833Right-handed 310
Helix 36
36
B
844 860Right-handed alpha
Helix 37
37
B
877 892Right-handed alpha
Helix 38
38
B
893 894Right-handed 310
Helix 39
39
B
895 899Right-handed 310
Helix 40
40
C
525 529Right-handed 310
Helix 41
41
C
545 558Right-handed alpha
Helix 42
42
C
560 564Right-handed 310
Helix 43
43
C
573 578Right-handed alpha
Helix 44
44
C
582 591Right-handed alpha
Helix 45
45
C
633 653Right-handed alpha
Helix 46
46
C
683 695Right-handed alpha
Helix 47
47
C
711 718Right-handed alpha
Helix 48
48
C
733 736Right-handed 310
Helix 49
49
C
749 753Right-handed 310
Helix 50
50
C
770 781Right-handed alpha
Helix 51
51
C
781 790Right-handed alpha
Helix 52
52
C
816 828Right-handed alpha
Helix 53
53
C
829 833Right-handed 310
Helix 54
54
C
844 860Right-handed alpha
Helix 55
55
C
869 873Right-handed 310
Helix 56
56
C
877 892Right-handed alpha
Helix 57
57
C
893 894Right-handed 310
Helix 58
58
C
895 899Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 3C0Y. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 567first strand
Strand 2
A
520 523parallel
Strand 3
A
659 662parallel
Strand 4
A
835 839parallel
Strand 5
A
793 798parallel
Strand 6
A
701 705parallel
Strand 7
A
724 731parallel
Strand 8
A
756 761parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
614 615first strand
Strand 2
A
621 622anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
565 567first strand
Strand 2
B
520 523parallel
Strand 3
B
659 662parallel
Strand 4
B
835 839parallel
Strand 5
B
793 798parallel
Strand 6
B
701 705parallel
Strand 7
B
724 731parallel
Strand 8
B
756 761parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
621 622first strand
Strand 2
B
628 629anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
565 567first strand
Strand 2
C
520 523parallel
Strand 3
C
659 662parallel
Strand 4
C
835 839parallel
Strand 5
C
793 798parallel
Strand 6
C
701 705parallel
Strand 7
C
724 731parallel
Strand 8
C
756 761parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
621 622first strand
Strand 2
C
628 629anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il