Analysis of interatomic Contacts of Structural Units in PDB entry:
3CL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3CL0 entry

There is 1 chain in PDB entry 3CL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 83ILE 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 3CL0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
104 109Right-handed alpha
Helix 2
2
A
142 146Right-handed 310
Helix 3
3
A
412 414Right-handed alpha
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There are 6 sheets in PDB entry 3CL0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 102first strand
Strand 2
A
439 449anti-parallel
Strand 3
A
419 429anti-parallel
Strand 4
A
407 412anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
115 124first strand
Strand 2
A
129 139anti-parallel
Strand 3
A
157 162anti-parallel
Strand 4
A
172 176anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
179 184first strand
Strand 2
A
189 195anti-parallel
Strand 3
A
202 207anti-parallel
Strand 4
A
210 216anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
231 233first strand
Strand 2
A
236 243anti-parallel
Strand 3
A
251 258anti-parallel
Strand 4
A
261 267anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
279 283first strand
Strand 2
A
286 290anti-parallel
Strand 3
A
301 305anti-parallel
Strand 4
A
312 316anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
352 356first strand
Strand 2
A
359 364anti-parallel
Strand 3
A
372 379anti-parallel
Strand 4
A
392 403anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il