Analysis of interatomic Contacts of Structural Units in PDB entry:
3DY8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3DY8 entry

There are 2 chains in PDB entry 3DY8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 178LYS 505
B
 GLY 178LYS 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 3DY8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
189 196Right-handed alpha
Helix 2
2
A
202 206Right-handed 310
Helix 3
3
A
207 222Right-handed alpha
Helix 4
4
A
223 229Right-handed alpha
Helix 5
5
A
231 245Right-handed alpha
Helix 6
6
A
253 271Right-handed alpha
Helix 7
7
A
272 276Right-handed 310
Helix 8
8
A
278 292Right-handed alpha
Helix 9
9
A
300 308Right-handed alpha
Helix 10
10
A
309 315Right-handed alpha
Helix 11
11
A
319 334Right-handed alpha
Helix 12
12
A
335 339Right-handed 310
Helix 13
13
A
345 363Right-handed alpha
Helix 14
14
A
364 366Right-handed 310
Helix 15
15
A
367 380Right-handed alpha
Helix 16
16
A
386 403Right-handed alpha
Helix 17
17
A
404 408Right-handed 310
Helix 18
18
A
409 434Right-handed alpha
Helix 19
19
A
439 443Right-handed 310
Helix 20
20
A
448 460Right-handed alpha
Helix 21
21
A
460 472Right-handed alpha
Helix 22
22
A
474 479Right-handed alpha
Helix 23
23
A
479 502Right-handed alpha
Helix 24
24
B
189 196Right-handed alpha
Helix 25
25
B
202 206Right-handed 310
Helix 26
26
B
207 222Right-handed alpha
Helix 27
27
B
223 229Right-handed alpha
Helix 28
28
B
231 246Right-handed alpha
Helix 29
29
B
253 271Right-handed alpha
Helix 30
30
B
272 277Right-handed alpha
Helix 31
31
B
278 292Right-handed alpha
Helix 32
32
B
300 308Right-handed alpha
Helix 33
33
B
309 316Right-handed alpha
Helix 34
34
B
319 334Right-handed alpha
Helix 35
35
B
335 339Right-handed 310
Helix 36
36
B
345 362Right-handed alpha
Helix 37
37
B
363 366Right-handed 310
Helix 38
38
B
367 380Right-handed alpha
Helix 39
39
B
386 403Right-handed alpha
Helix 40
40
B
404 408Right-handed 310
Helix 41
41
B
409 435Right-handed alpha
Helix 42
42
B
439 443Right-handed 310
Helix 43
43
B
448 460Right-handed alpha
Helix 44
44
B
460 472Right-handed alpha
Helix 45
45
B
474 479Right-handed alpha
Helix 46
46
B
479 505Right-handed alpha
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There are no sheets in PDB entry 3DY8
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