Analysis of interatomic Contacts of Structural Units in PDB entry:
3E0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E0C entry

There is 1 chain in PDB entry 3E0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 1140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3E0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
250 254Right-handed 310
Helix 2
2
A
381 384Right-handed 310
Helix 3
3
A
728 730Right-handed 310
Helix 4
4
A
755 759Right-handed 310
Helix 5
5
A
1044 1062Right-handed alpha
Helix 6
6
A
1069 1074Right-handed alpha
Helix 7
7
A
1091 1096Right-handed alpha
Helix 8
8
A
1097 1099Right-handed 310
Helix 9
9
A
1101 1110Right-handed alpha
Helix 10
10
A
1125 1138Right-handed alpha
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There are 23 sheets in PDB entry 3E0C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1004 1009first strand
Strand 2
A
1025 1032anti-parallel
Strand 3
A
1037 1042anti-parallel
Strand 4
A
4 10anti-parallel
Strand 5
A
1088 1090parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
38 43anti-parallel
Strand 4
A
50 56anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 67first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
85 92anti-parallel
Strand 4
A
99 107anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
130 136anti-parallel
Strand 3
A
139 144anti-parallel
Strand 4
A
155 158anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
177 182anti-parallel
Strand 3
A
189 196anti-parallel
Strand 4
A
201 204anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
177 182anti-parallel
Strand 3
A
189 196anti-parallel
Strand 4
A
209 211anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 221first strand
Strand 2
A
229 232anti-parallel
Strand 3
A
237 240anti-parallel
Strand 4
A
247 248anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 263first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
279 286anti-parallel
Strand 4
A
299 307anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 316first strand
Strand 2
A
321 326anti-parallel
Strand 3
A
331 336anti-parallel
Strand 4
A
347 353anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 365first strand
Strand 2
A
374 379anti-parallel
Strand 3
A
386 392anti-parallel
Strand 4
A
710 716anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 403first strand
Strand 2
A
698 704anti-parallel
Strand 3
A
691 694anti-parallel
Strand 4
A
678 681anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 413first strand
Strand 2
A
424 429anti-parallel
Strand 3
A
432 437anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 463first strand
Strand 2
A
467 472anti-parallel
Strand 3
A
476 480anti-parallel
Strand 4
A
486 490anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 503first strand
Strand 2
A
507 512anti-parallel
Strand 3
A
515 522anti-parallel
Strand 4
A
525 533anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 542first strand
Strand 2
A
555 560anti-parallel
Strand 3
A
565 570anti-parallel
Strand 4
A
576 581anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 596first strand
Strand 2
A
599 606anti-parallel
Strand 3
A
610 616anti-parallel
Strand 4
A
623 624anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 596first strand
Strand 2
A
599 606anti-parallel
Strand 3
A
610 616anti-parallel
Strand 4
A
628 630anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
637 642first strand
Strand 2
A
647 652anti-parallel
Strand 3
A
657 660anti-parallel
Strand 4
A
667 670anti-parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
720 727first strand
Strand 2
A
732 740anti-parallel
Strand 3
A
787 795anti-parallel
Strand 4
A
801 806anti-parallel
Strand 5
A
762 765parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
811 819first strand
Strand 2
A
828 835anti-parallel
Strand 3
A
846 852anti-parallel
Strand 4
A
859 866anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
870 876first strand
Strand 2
A
879 884anti-parallel
Strand 3
A
887 893anti-parallel
Strand 4
A
899 905anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
911 917first strand
Strand 2
A
920 925anti-parallel
Strand 3
A
930 935anti-parallel
Strand 4
A
942 947anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
954 961first strand
Strand 2
A
964 969anti-parallel
Strand 3
A
973 978anti-parallel
Strand 4
A
993 999anti-parallel
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