Analysis of interatomic Contacts of Structural Units in PDB entry:
3E77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3E77 entry

There are 3 chains in PDB entry 3E77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8LEU 370
B
 GLU 9LEU 370
C
 THR 8GLN 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 3E77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 28Right-handed alpha
Helix 2
2
A
31 35Right-handed 310
Helix 3
3
A
46 65Right-handed alpha
Helix 4
4
A
77 91Right-handed alpha
Helix 5
5
A
92 94Right-handed 310
Helix 6
6
A
105 116Right-handed alpha
Helix 7
7
A
136 140Right-handed 310
Helix 8
8
A
187 191Right-handed 310
Helix 9
9
A
225 228Right-handed 310
Helix 10
10
A
229 235Right-handed alpha
Helix 11
11
A
244 261Right-handed alpha
Helix 12
12
A
262 284Right-handed alpha
Helix 13
13
A
294 298Right-handed 310
Helix 14
14
A
313 327Right-handed alpha
Helix 15
15
A
350 369Right-handed alpha
Helix 16
16
B
18 29Right-handed alpha
Helix 17
17
B
31 35Right-handed 310
Helix 18
18
B
38 42Right-handed 310
Helix 19
19
B
46 65Right-handed alpha
Helix 20
20
B
77 91Right-handed alpha
Helix 21
21
B
92 94Right-handed 310
Helix 22
22
B
105 115Right-handed alpha
Helix 23
23
B
116 118Right-handed 310
Helix 24
24
B
136 140Right-handed 310
Helix 25
25
B
178 181Right-handed 310
Helix 26
26
B
187 191Right-handed 310
Helix 27
27
B
215 217Right-handed 310
Helix 28
28
B
225 228Right-handed 310
Helix 29
29
B
229 235Right-handed alpha
Helix 30
30
B
244 261Right-handed alpha
Helix 31
31
B
262 285Right-handed alpha
Helix 32
32
B
294 298Right-handed 310
Helix 33
33
B
313 327Right-handed alpha
Helix 34
34
B
350 369Right-handed alpha
Helix 35
35
C
18 29Right-handed alpha
Helix 36
36
C
31 35Right-handed 310
Helix 37
37
C
46 65Right-handed alpha
Helix 38
38
C
77 91Right-handed alpha
Helix 39
39
C
92 94Right-handed 310
Helix 40
40
C
105 116Right-handed alpha
Helix 41
41
C
136 140Right-handed 310
Helix 42
42
C
187 191Right-handed 310
Helix 43
43
C
225 228Right-handed 310
Helix 44
44
C
229 235Right-handed alpha
Helix 45
45
C
244 261Right-handed alpha
Helix 46
46
C
262 285Right-handed alpha
Helix 47
47
C
294 298Right-handed 310
Helix 48
48
C
313 327Right-handed alpha
Helix 49
49
C
350 367Right-handed alpha
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There are 12 sheets in PDB entry 3E77. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
329 330parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 75first strand
Strand 2
A
208 213anti-parallel
Strand 3
A
193 197anti-parallel
Strand 4
A
173 176parallel
Strand 5
A
149 152parallel
Strand 6
A
98 101parallel
Strand 7
A
120 123parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
160 161anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
302 307anti-parallel
Strand 3
A
341 344anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 12first strand
Strand 2
B
329 330parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 75first strand
Strand 2
B
208 213anti-parallel
Strand 3
B
193 197anti-parallel
Strand 4
B
173 176parallel
Strand 5
B
148 152parallel
Strand 6
B
98 101parallel
Strand 7
B
120 123parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
160 161anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
302 307anti-parallel
Strand 3
B
341 344anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 12first strand
Strand 2
C
329 330parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 75first strand
Strand 2
C
208 213anti-parallel
Strand 3
C
193 197anti-parallel
Strand 4
C
173 176parallel
Strand 5
C
149 152parallel
Strand 6
C
98 101parallel
Strand 7
C
120 123parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 155first strand
Strand 2
C
160 161anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
289 290first strand
Strand 2
C
302 307anti-parallel
Strand 3
C
341 344anti-parallel
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