Analysis of interatomic Contacts of Structural Units in PDB entry:
3EAG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3EAG entry

There are 2 chains in PDB entry 3EAG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ARG 323
B
 ALA 0ARG 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 3EAG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
38 46Right-handed alpha
Helix 3
3
A
55 61Right-handed 310
Helix 4
5
A
93 101Right-handed alpha
Helix 5
6
A
102 105Right-handed 310
Helix 6
7
A
115 130Right-handed alpha
Helix 7
8
A
184 187Right-handed 310
Helix 8
9
A
207 220Right-handed alpha
Helix 9
10
A
234 242Right-handed alpha
Helix 10
11
A
287 304Right-handed alpha
Helix 11
12
A
307 317Right-handed alpha
Helix 12
13
B
11 24Right-handed alpha
Helix 13
14
B
38 45Right-handed alpha
Helix 14
15
B
57 62Right-handed alpha
Helix 15
17
B
93 101Right-handed alpha
Helix 16
18
B
102 105Right-handed 310
Helix 17
19
B
115 130Right-handed alpha
Helix 18
20
B
184 187Right-handed 310
Helix 19
21
B
208 220Right-handed alpha
Helix 20
22
B
234 243Right-handed alpha
Helix 21
23
B
287 304Right-handed alpha
Helix 22
24
B
307 317Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 3EAG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 52first strand
Strand 2
A
27 32parallel
Strand 3
A
3 7parallel
Strand 4
A
66 69parallel
Strand 5
A
90 92parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
135 137anti-parallel
Strand 3
A
165 169parallel
Strand 4
A
106 111parallel
Strand 5
A
191 194parallel
Strand 6
A
227 231parallel
Strand 7
A
249 252parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
321 322anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
179 182anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 263first strand
Strand 2
A
269 273anti-parallel
Strand 3
A
276 281anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
27 32parallel
Strand 3
B
3 7parallel
Strand 4
B
66 69parallel
Strand 5
B
90 92parallel
Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
135 137anti-parallel
Strand 3
B
165 169parallel
Strand 4
B
106 111parallel
Strand 5
B
191 194parallel
Strand 6
B
227 231parallel
Strand 7
B
249 252parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 176first strand
Strand 2
B
179 182anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 260first strand
Strand 2
B
269 273anti-parallel
Strand 3
B
276 281anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il