Analysis of interatomic Contacts of Structural Units in PDB entry:
3FA7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FA7 entry

There are 2 chains in PDB entry 3FA7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 1GLU 137
B
PRO 1GLU 137
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3FA7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 21Right-handed alpha
Helix 2
2
A
25 34Right-handed alpha
Helix 3
3
A
35 38Right-handed 310
Helix 4
4
B
14 22Right-handed alpha
Helix 5
5
B
25 36Right-handed alpha
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There are 2 sheets in PDB entry 3FA7. Click on sheet of interest to get list of strands forming it: A, B,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
60 66first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
40 46anti-parallel
Strand 4
A
5 13anti-parallel
Strand 5
A
128 136anti-parallel
Strand 6
A
118 125anti-parallel
Strand 7
A
107 113anti-parallel
Strand 8
A
92 99anti-parallel
Strand 9
A
80 89anti-parallel
Strand 10
A
71 74anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
60 66first strand
Strand 2
B
49 55anti-parallel
Strand 3
B
40 46anti-parallel
Strand 4
B
5 13anti-parallel
Strand 5
B
128 136anti-parallel
Strand 6
B
118 125anti-parallel
Strand 7
B
107 113anti-parallel
Strand 8
B
92 99anti-parallel
Strand 9
B
80 89anti-parallel
Strand 10
B
71 74anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il