Analysis of interatomic Contacts of Structural Units in PDB entry:
3FGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FGW entry

There is 1 chain in PDB entry 3FGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 61ASP 594
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3FGW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
115 131Right-handed alpha
Helix 2
2
A
131 142Right-handed alpha
Helix 3
3
A
153 178Right-handed alpha
Helix 4
4
A
181 202Right-handed alpha
Helix 5
5
A
227 235Right-handed alpha
Helix 6
6
A
257 260Right-handed 310
Helix 7
7
A
273 275Right-handed 310
Helix 8
8
A
335 342Right-handed 310
Helix 9
9
A
349 361Right-handed alpha
Helix 10
10
A
363 373Right-handed alpha
Helix 11
11
A
418 426Right-handed alpha
Helix 12
12
A
436 443Right-handed alpha
Helix 13
13
A
445 453Right-handed alpha
Helix 14
14
A
454 456Right-handed 310
Helix 15
15
A
461 471Right-handed alpha
Helix 16
16
A
472 474Right-handed 310
Helix 17
17
A
476 485Right-handed alpha
Helix 18
18
A
492 496Right-handed 310
Helix 19
19
A
513 517Right-handed 310
Helix 20
20
A
525 529Right-handed 310
Helix 21
21
A
542 548Right-handed alpha
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There are 3 sheets in PDB entry 3FGW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 82first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
90 96anti-parallel
Strand 4
A
104 110anti-parallel
Strand 5
A
278 283parallel
Strand 6
A
301 306anti-parallel
Strand 7
A
317 320anti-parallel
Strand 8
A
324 330anti-parallel
Strand 9
A
381 387anti-parallel
Strand 10
A
403 409anti-parallel
Strand 11
A
412 417anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
427 430first strand
Strand 2
A
250 255anti-parallel
Strand 3
A
262 267anti-parallel
Strand 4
A
537 541anti-parallel
Strand 5
A
551 555anti-parallel
Strand 6
A
589 591anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
269 271first strand
Strand 2
A
533 535anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il