Analysis of interatomic Contacts of Structural Units in PDB entry:
3FIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FIE entry

There are 4 chains in PDB entry 3FIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ILE 416
B
 PRO 2ILE 412
C
 ASN 25ASP 57
D
 ASN 25ASP 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3FIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 60Right-handed 310
Helix 2
2
A
80 100Right-handed alpha
Helix 3
3
A
101 114Right-handed alpha
Helix 4
4
A
181 185Right-handed 310
Helix 5
5
A
220 237Right-handed alpha
Helix 6
6
A
240 246Right-handed alpha
Helix 7
7
A
264 271Right-handed alpha
Helix 8
8
A
272 278Right-handed 310
Helix 9
9
A
279 303Right-handed alpha
Helix 10
10
A
312 324Right-handed alpha
Helix 11
11
A
337 350Right-handed alpha
Helix 12
12
A
352 360Right-handed alpha
Helix 13
13
A
394 405Right-handed 310
Helix 14
14
A
409 416Right-handed alpha
Helix 15
15
B
55 60Right-handed 310
Helix 16
16
B
80 100Right-handed alpha
Helix 17
17
B
101 114Right-handed alpha
Helix 18
18
B
181 185Right-handed 310
Helix 19
19
B
220 237Right-handed alpha
Helix 20
20
B
264 271Right-handed alpha
Helix 21
21
B
272 278Right-handed 310
Helix 22
22
B
279 304Right-handed alpha
Helix 23
23
B
312 324Right-handed alpha
Helix 24
24
B
337 350Right-handed alpha
Helix 25
25
B
352 360Right-handed alpha
Helix 26
26
B
394 402Right-handed 310
Helix 27
27
C
49 54Right-handed alpha
Helix 28
28
D
49 54Right-handed alpha
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There are 10 sheets in PDB entry 3FIE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
191 194anti-parallel
Strand 3
A
153 157parallel
Strand 4
A
43 49parallel
Strand 5
A
34 40anti-parallel
Strand 6
A
19 22anti-parallel
Strand 7
A
136 140anti-parallel
Strand 8
A
146 150anti-parallel
Strand 9
C
34 35anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
179 180anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
374 376anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 251first strand
Strand 2
A
259 263anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
334 336anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
191 194anti-parallel
Strand 3
B
153 157parallel
Strand 4
B
43 49parallel
Strand 5
B
34 40anti-parallel
Strand 6
B
19 22anti-parallel
Strand 7
B
136 140anti-parallel
Strand 8
B
146 150anti-parallel
Strand 9
D
34 35anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 173first strand
Strand 2
B
179 180anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
199 203anti-parallel
Strand 3
B
373 376anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 251first strand
Strand 2
B
259 263anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
326 328first strand
Strand 2
B
334 336anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il