Analysis of interatomic Contacts of Structural Units in PDB entry:
3FPL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3FPL entry

There is 1 chain in PDB entry 3FPL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3FPL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 47Right-handed alpha
Helix 2
2
A
92 97Right-handed alpha
Helix 3
3
A
99 103Right-handed 310
Helix 4
4
A
128 133Right-handed alpha
Helix 5
5
A
141 147Right-handed alpha
Helix 6
6
A
150 162Right-handed alpha
Helix 7
7
A
176 188Right-handed alpha
Helix 8
8
A
200 211Right-handed alpha
Helix 9
9
A
217 221Right-handed 310
Helix 10
10
A
222 231Right-handed alpha
Helix 11
11
A
247 255Right-handed alpha
Helix 12
12
A
278 285Right-handed 310
Helix 13
13
A
297 311Right-handed alpha
Helix 14
14
A
315 318Right-handed 310
Helix 15
15
A
329 340Right-handed alpha
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There are 4 sheets in PDB entry 3FPL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 16first strand
Strand 2
A
2 8anti-parallel
Strand 3
A
55 56anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
27 34anti-parallel
Strand 3
A
61 68anti-parallel
Strand 4
A
80 83anti-parallel
Strand 5
A
134 135anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
27 34anti-parallel
Strand 3
A
346 350anti-parallel
Strand 4
A
320 325parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 216first strand
Strand 2
A
194 197parallel
Strand 3
A
170 173parallel
Strand 4
A
236 241parallel
Strand 5
A
256 264parallel
Strand 6
A
289 292parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il