Analysis of interatomic Contacts of Structural Units in PDB entry:
3G0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G0H entry

There are 2 chains in PDB entry 3G0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 60ASP 467
E
 U 1 U 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 3G0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 65Right-handed 310
Helix 2
2
A
66 71Right-handed alpha
Helix 3
3
A
75 81Right-handed alpha
Helix 4
4
A
94 98Right-handed 310
Helix 5
5
A
100 110Right-handed alpha
Helix 6
6
A
116 128Right-handed alpha
Helix 7
7
A
143 154Right-handed alpha
Helix 8
8
A
171 186Right-handed alpha
Helix 9
9
A
217 225Right-handed alpha
Helix 10
10
A
232 236Right-handed 310
Helix 11
11
A
243 249Right-handed alpha
Helix 12
12
A
253 263Right-handed alpha
Helix 13
13
A
278 289Right-handed alpha
Helix 14
14
A
298 303Right-handed 310
Helix 15
15
A
316 332Right-handed alpha
Helix 16
16
A
342 356Right-handed alpha
Helix 17
17
A
368 381Right-handed alpha
Helix 18
18
A
391 394Right-handed 310
Helix 19
19
A
419 428Right-handed alpha
Helix 20
20
A
445 459Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3G0H. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
213 216parallel
Strand 3
A
165 168parallel
Strand 4
A
238 242parallel
Strand 5
A
269 274parallel
Strand 6
A
133 137parallel
Strand 7
A
292 295parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 363first strand
Strand 2
A
386 389parallel
Strand 3
A
335 339parallel
Strand 4
A
402 407parallel
Strand 5
A
437 443parallel
Strand 6
A
307 313parallel
Strand 7
A
464 465parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il