Analysis of interatomic Contacts of Structural Units in PDB entry:
3GTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GTL entry

There are 13 chains in PDB entry 3GTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3ILE 1445
B
ASP 20PHE 1224
C
GLU 3ASP 268
E
ASP 2MET 215
F
LYS 72LEU 155
H
SER 2ARG 146
I
THR 2GLN 120
J
MET 1PRO 65
K
MET 1LEU 114
L
ALA 25ARG 70
R
A 1 U 12
T
C 1 T 28
N
C 1 G 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are130 helices in PDB entry 3GTL. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 31Right-handed alpha
Helix 2
2
A
95 103Right-handed alpha
Helix 3
3
A
121 125Right-handed 310
Helix 4
4
A
130 140Right-handed alpha
Helix 5
5
A
203 213Right-handed alpha
Helix 6
6
A
215 222Right-handed alpha
Helix 7
7
A
243 247Right-handed 310
Helix 8
8
A
261 272Right-handed alpha
Helix 9
9
A
285 287Right-handed 310
Helix 10
10
A
288 295Right-handed alpha
Helix 11
11
A
296 304Right-handed alpha
Helix 12
12
A
368 372Right-handed alpha
Helix 13
13
A
384 394Right-handed alpha
Helix 14
14
A
451 455Right-handed 310
Helix 15
15
A
471 475Right-handed 310
Helix 16
16
A
494 503Right-handed alpha
Helix 17
17
A
507 511Right-handed 310
Helix 18
18
A
513 517Right-handed 310
Helix 19
19
A
524 532Right-handed alpha
Helix 20
20
A
533 536Right-handed 310
Helix 21
21
A
543 553Right-handed alpha
Helix 22
22
A
574 579Right-handed alpha
Helix 23
23
A
618 623Right-handed alpha
Helix 24
24
A
628 638Right-handed alpha
Helix 25
25
A
638 659Right-handed alpha
Helix 26
26
A
665 670Right-handed 310
Helix 27
27
A
672 698Right-handed alpha
Helix 28
28
A
709 737Right-handed alpha
Helix 29
29
A
741 750Right-handed alpha
Helix 30
30
A
755 763Right-handed alpha
Helix 31
31
A
793 798Right-handed alpha
Helix 32
32
A
809 830Right-handed alpha
Helix 33
33
A
831 846Right-handed alpha
Helix 34
34
A
867 871Right-handed 310
Helix 35
35
A
889 898Right-handed alpha
Helix 36
36
A
927 947Right-handed alpha
Helix 37
37
A
959 966Right-handed alpha
Helix 38
38
A
982 994Right-handed alpha
Helix 39
39
A
995 997Right-handed 310
Helix 40
40
A
1006 1010Right-handed 310
Helix 41
41
A
1012 1014Right-handed 310
Helix 42
42
A
1015 1026Right-handed alpha
Helix 43
43
A
1027 1035Right-handed alpha
Helix 44
44
A
1038 1055Right-handed alpha
Helix 45
45
A
1063 1077Right-handed alpha
Helix 46
46
A
1097 1106Right-handed alpha
Helix 47
47
A
1127 1137Right-handed alpha
Helix 48
48
A
1143 1145Right-handed 310
Helix 49
49
A
1166 1172Right-handed alpha
Helix 50
50
A
1200 1205Right-handed alpha
Helix 51
51
A
1208 1221Right-handed alpha
Helix 52
52
A
1263 1269Right-handed alpha
Helix 53
53
A
1312 1317Right-handed alpha
Helix 54
54
A
1331 1340Right-handed alpha
Helix 55
55
A
1340 1359Right-handed alpha
Helix 56
56
A
1364 1378Right-handed alpha
Helix 57
57
A
1388 1392Right-handed 310
Helix 58
58
A
1395 1402Right-handed alpha
Helix 59
59
A
1404 1415Right-handed alpha
Helix 60
60
A
1424 1429Right-handed alpha
Helix 61
61
A
1436 1440Right-handed 310
Helix 62
62
B
26 28Right-handed 310
Helix 63
63
B
29 40Right-handed alpha
Helix 64
64
B
44 56Right-handed alpha
Helix 65
65
B
57 64Right-handed alpha
Helix 66
66
B
113 118Right-handed alpha
Helix 67
67
B
179 184Right-handed 310
Helix 68
68
B
185 192Right-handed alpha
Helix 69
69
B
281 289Right-handed alpha
Helix 70
70
B
295 302Right-handed alpha
Helix 71
71
B
307 322Right-handed alpha
Helix 72
72
B
326 331Right-handed alpha
Helix 73
73
B
346 354Right-handed alpha
Helix 74
74
B
355 357Right-handed 310
Helix 75
75
B
370 390Right-handed alpha
Helix 76
76
B
400 402Right-handed 310
Helix 77
77
B
408 434Right-handed alpha
Helix 78
78
B
450 464Right-handed alpha
Helix 79
79
B
473 478Right-handed 310
Helix 80
80
B
487 496Right-handed alpha
Helix 81
81
B
515 519Right-handed 310
Helix 82
82
B
551 560Right-handed alpha
Helix 83
83
B
565 569Right-handed 310
Helix 84
84
B
592 605Right-handed alpha
Helix 85
85
B
619 622Right-handed 310
Helix 86
86
B
654 662Right-handed alpha
Helix 87
87
B
662 667Right-handed alpha
Helix 88
88
B
680 688Right-handed alpha
Helix 89
89
B
695 699Right-handed alpha
Helix 90
90
B
744 749Right-handed 310
Helix 91
91
B
752 756Right-handed 310
Helix 92
92
B
763 774Right-handed alpha
Helix 93
93
B
775 777Right-handed 310
Helix 94
94
B
782 787Right-handed 310
Helix 95
95
B
843 848Right-handed alpha
Helix 96
96
B
1013 1017Right-handed 310
Helix 97
97
B
1022 1027Right-handed alpha
Helix 98
98
B
1028 1039Right-handed alpha
Helix 99
99
B
1051 1062Right-handed alpha
Helix 100
100
B
1098 1102Right-handed 310
Helix 101
101
B
1131 1142Right-handed alpha
Helix 102
102
B
1144 1150Right-handed alpha
Helix 103
103
B
1197 1210Right-handed alpha
Helix 104
104
C
26 39Right-handed alpha
Helix 105
105
C
59 70Right-handed alpha
Helix 106
106
C
75 80Right-handed 310
Helix 107
107
C
204 208Right-handed 310
Helix 108
108
C
239 264Right-handed alpha
Helix 109
109
E
6 27Right-handed alpha
Helix 110
110
E
38 46Right-handed alpha
Helix 111
111
E
54 58Right-handed 310
Helix 112
112
E
67 72Right-handed alpha
Helix 113
113
E
89 104Right-handed alpha
Helix 114
114
E
120 124Right-handed 310
Helix 115
115
E
138 141Right-handed 310
Helix 116
116
E
143 147Right-handed 310
Helix 117
117
E
157 168Right-handed alpha
Helix 118
118
E
171 175Right-handed 310
Helix 119
119
E
182 189Right-handed alpha
Helix 120
120
F
86 103Right-handed alpha
Helix 121
121
F
116 127Right-handed alpha
Helix 122
122
H
128 133Right-handed 310
Helix 123
123
I
59 64Right-handed 310
Helix 124
124
J
16 27Right-handed alpha
Helix 125
125
J
33 38Right-handed alpha
Helix 126
126
J
43 52Right-handed alpha
Helix 127
127
J
56 61Right-handed alpha
Helix 128
128
K
5 10Right-handed 310
Helix 129
129
K
42 50Right-handed alpha
Helix 130
130
K
82 112Right-handed alpha
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There are 41 sheets in PDB entry 3GTL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1418 1419first strand
Strand 2
A
16 19anti-parallel
Strand 3
B
1214 1217anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
82 90first strand
Strand 2
A
236 241anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
175 177first strand
Strand 2
A
180 182anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
344 345first strand
Strand 2
B
1128 1129anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1104 1106first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
486 490anti-parallel
Strand 4
A
442 445anti-parallel
Strand 5
A
456 463anti-parallel
Strand 6
A
363 367parallel
Strand 7
A
468 470anti-parallel
Strand 8
A
348 355parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
376 379first strand
Strand 2
A
431 434anti-parallel
Strand 3
A
402 406anti-parallel
Strand 4
A
412 413anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 542first strand
Strand 2
A
571 573anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
587 589first strand
Strand 2
A
605 608anti-parallel
Strand 3
A
611 615anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
766 767first strand
Strand 2
A
799 800anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
878 882first strand
Strand 2
A
953 957anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1283 1287first strand
Strand 2
A
1303 1307anti-parallel
Strand 3
A
1116 1119anti-parallel
Strand 4
A
1328 1329anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1225 1228first strand
Strand 2
A
1237 1241anti-parallel
Strand 3
A
1191 1197anti-parallel
Strand 4
A
1147 1154anti-parallel
Strand 5
I
42 45anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1290 1292first strand
Strand 2
A
1298 1300anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1442 1444first strand
Strand 2
F
133 137anti-parallel
Strand 3
F
143 147anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
95 97first strand
Strand 2
B
125 130anti-parallel
Strand 3
B
165 171anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
101 103first strand
Strand 2
B
109 111anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
203 204first strand
Strand 2
B
209 210anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
215 218first strand
Strand 2
B
404 407anti-parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
224 225first strand
Strand 2
B
238 242anti-parallel
Strand 3
B
252 255anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
497 498first strand
Strand 2
B
537 538anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
633 635anti-parallel
Strand 3
B
693 694anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
563 564first strand
Strand 2
B
589 590anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
585 586first strand
Strand 2
B
581 582anti-parallel
Strand 3
B
624 627parallel
Strand 4
B
614 617anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
638 639first strand
Strand 2
B
740 741anti-parallel
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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
794 796first strand
Strand 2
B
853 861anti-parallel
Strand 3
B
961 972anti-parallel
Strand 4
B
946 951anti-parallel
Strand 5
B
904 906anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
794 796first strand
Strand 2
B
853 861anti-parallel
Strand 3
B
961 972anti-parallel
Strand 4
B
954 957anti-parallel
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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
989 994first strand
Strand 2
B
838 842parallel
Strand 3
B
1010 1012anti-parallel
Strand 4
B
824 827parallel
Strand 5
B
1087 1089anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
915 917first strand
Strand 2
B
934 936anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1001 1002first strand
Strand 2
B
1072 1073anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1159 1163first strand
Strand 2
B
1191 1195anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
7 13first strand
Strand 2
C
18 23anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
43 51first strand
Strand 2
C
155 162anti-parallel
Strand 3
C
97 101anti-parallel
Strand 4
C
119 120anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
111 113first strand
Strand 2
C
145 147anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
176 179first strand
Strand 2
C
229 232anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
61 62first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
107 112parallel
Strand 4
E
131 136parallel
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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
87 88first strand
Strand 2
E
115 116parallel
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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
177 178first strand
Strand 2
E
207 214parallel
Strand 3
E
196 201anti-parallel
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There are 9 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
95 98first strand
Strand 2
H
141 145anti-parallel
Strand 3
H
54 58anti-parallel
Strand 4
H
7 16anti-parallel
Strand 5
H
24 30anti-parallel
Strand 6
H
37 42anti-parallel
Strand 7
H
121 127anti-parallel
Strand 8
H
112 118anti-parallel
Strand 9
H
100 105anti-parallel
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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
15 19first strand
Strand 2
I
24 28anti-parallel
Strand 3
I
35 37anti-parallel
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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
100 102first strand
Strand 2
I
109 111anti-parallel
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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
19 23first strand
Strand 2
K
30 35anti-parallel
Strand 3
K
72 77anti-parallel
Strand 4
K
56 62anti-parallel
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