Analysis of interatomic Contacts of Structural Units in PDB entry:
3H1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H1L entry

There are 20 chains in PDB entry 3H1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 2ILE 444
B
PRO 19LEU 439
C
MET 1TYR 380
D
GLY 1LYS 241
E
VAL 1GLY 196
F
GLY 10LYS 110
G
GLY 1GLN 81
H
GLU 9LYS 78
I
UNK 28ARG 77
J
ALA 4GLU 64
N
THR 3ILE 444
O
CYS 18LEU 439
P
ALA 2TYR 380
Q
GLY 1LYS 241
R
VAL 1GLY 196
S
GLY 10LYS 110
T
GLY 1ASN 79
U
GLU 12LYS 78
V
UNK 28ARG 77
W
ALA 4SER 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are190 helices in PDB entry 3H1L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
3 11Right-handed alpha
Helix 2
2
A
54 61Right-handed alpha
Helix 3
3
A
71 81Right-handed alpha
Helix 4
4
A
105 119Right-handed alpha
Helix 5
5
A
123 128Right-handed alpha
Helix 6
6
A
129 142Right-handed alpha
Helix 7
7
A
144 158Right-handed alpha
Helix 8
8
A
170 177Right-handed alpha
Helix 9
9
A
178 190Right-handed alpha
Helix 10
10
A
191 194Right-handed 310
Helix 11
11
A
204 216Right-handed alpha
Helix 12
12
A
265 278Right-handed alpha
Helix 13
13
A
286 290Right-handed 310
Helix 14
14
A
292 302Right-handed alpha
Helix 15
15
A
327 329Right-handed 310
Helix 16
16
A
330 348Right-handed alpha
Helix 17
17
A
350 367Right-handed alpha
Helix 18
18
A
368 370Right-handed 310
Helix 19
19
A
371 387Right-handed alpha
Helix 20
20
A
391 402Right-handed alpha
Helix 21
21
A
403 415Right-handed alpha
Helix 22
22
A
433 440Right-handed alpha
Helix 23
23
B
64 72Right-handed alpha
Helix 24
24
B
81 91Right-handed alpha
Helix 25
25
B
115 129Right-handed alpha
Helix 26
26
B
133 141Right-handed alpha
Helix 27
27
B
142 152Right-handed alpha
Helix 28
28
B
154 168Right-handed alpha
Helix 29
29
B
170 174Right-handed 310
Helix 30
30
B
179 183Right-handed 310
Helix 31
31
B
187 197Right-handed alpha
Helix 32
32
B
212 224Right-handed alpha
Helix 33
33
B
268 280Right-handed alpha
Helix 34
34
B
293 301Right-handed alpha
Helix 35
35
B
332 346Right-handed alpha
Helix 36
36
B
355 372Right-handed alpha
Helix 37
37
B
374 388Right-handed alpha
Helix 38
38
B
396 404Right-handed alpha
Helix 39
39
B
406 420Right-handed alpha
Helix 40
40
B
429 433Right-handed 310
Helix 41
41
B
435 439Right-handed 310
Helix 42
42
C
11 18Right-handed alpha
Helix 43
43
C
29 32Right-handed 310
Helix 44
44
C
33 54Right-handed alpha
Helix 45
45
C
62 73Right-handed alpha
Helix 46
46
C
76 105Right-handed alpha
Helix 47
47
C
106 109Right-handed 310
Helix 48
48
C
110 134Right-handed alpha
Helix 49
49
C
137 150Right-handed alpha
Helix 50
50
C
151 154Right-handed 310
Helix 51
51
C
156 167Right-handed alpha
Helix 52
52
C
172 205Right-handed alpha
Helix 53
53
C
221 247Right-handed alpha
Helix 54
54
C
254 258Right-handed 310
Helix 55
55
C
272 274Right-handed 310
Helix 56
56
C
275 283Right-handed alpha
Helix 57
57
C
287 301Right-handed alpha
Helix 58
58
C
302 309Right-handed 310
Helix 59
59
C
319 341Right-handed alpha
Helix 60
60
C
347 365Right-handed alpha
Helix 61
61
C
365 378Right-handed alpha
Helix 62
62
D
22 36Right-handed alpha
Helix 63
63
D
37 40Right-handed 310
Helix 64
64
D
47 52Right-handed alpha
Helix 65
65
D
57 67Right-handed alpha
Helix 66
66
D
97 104Right-handed alpha
Helix 67
67
D
115 120Right-handed alpha
Helix 68
68
D
122 133Right-handed alpha
Helix 69
69
D
178 195Right-handed alpha
Helix 70
70
D
197 233Right-handed alpha
Helix 71
71
E
15 19Right-handed 310
Helix 72
72
E
25 60Right-handed alpha
Helix 73
73
E
102 107Right-handed alpha
Helix 74
74
E
108 111Right-handed 310
Helix 75
75
E
122 126Right-handed 310
Helix 76
76
F
11 25Right-handed alpha
Helix 77
77
F
26 30Right-handed 310
Helix 78
78
F
32 37Right-handed 310
Helix 79
79
F
40 49Right-handed alpha
Helix 80
80
F
51 72Right-handed alpha
Helix 81
81
F
76 80Right-handed 310
Helix 82
82
F
90 108Right-handed alpha
Helix 83
83
G
20 23Right-handed 310
Helix 84
84
G
32 46Right-handed alpha
Helix 85
85
G
48 69Right-handed alpha
Helix 86
86
G
73 77Right-handed 310
Helix 87
87
H
15 25Right-handed alpha
Helix 88
88
H
27 47Right-handed alpha
Helix 89
89
H
54 71Right-handed alpha
Helix 90
90
H
72 77Right-handed alpha
Helix 91
91
I
51 56Right-handed alpha
Helix 92
92
J
4 13Right-handed alpha
Helix 93
93
J
16 47Right-handed alpha
Helix 94
94
J
51 56Right-handed alpha
Helix 95
95
J
57 59Right-handed 310
Helix 96
96
N
3 11Right-handed alpha
Helix 97
97
N
54 61Right-handed alpha
Helix 98
98
N
71 81Right-handed alpha
Helix 99
99
N
105 118Right-handed alpha
Helix 100
100
N
129 142Right-handed alpha
Helix 101
101
N
144 158Right-handed alpha
Helix 102
102
N
170 177Right-handed alpha
Helix 103
103
N
178 190Right-handed alpha
Helix 104
104
N
191 194Right-handed 310
Helix 105
105
N
204 216Right-handed alpha
Helix 106
106
N
223 227Right-handed 310
Helix 107
107
N
265 278Right-handed alpha
Helix 108
108
N
286 290Right-handed 310
Helix 109
109
N
292 302Right-handed alpha
Helix 110
110
N
327 329Right-handed 310
Helix 111
111
N
330 349Right-handed alpha
Helix 112
112
N
350 367Right-handed alpha
Helix 113
113
N
368 370Right-handed 310
Helix 114
114
N
371 387Right-handed alpha
Helix 115
115
N
391 402Right-handed alpha
Helix 116
116
N
403 415Right-handed alpha
Helix 117
117
N
433 440Right-handed alpha
Helix 118
118
O
64 72Right-handed alpha
Helix 119
119
O
81 91Right-handed alpha
Helix 120
120
O
115 129Right-handed alpha
Helix 121
121
O
133 141Right-handed alpha
Helix 122
122
O
142 152Right-handed alpha
Helix 123
123
O
154 168Right-handed alpha
Helix 124
124
O
170 174Right-handed 310
Helix 125
125
O
179 183Right-handed 310
Helix 126
126
O
187 197Right-handed alpha
Helix 127
127
O
212 223Right-handed alpha
Helix 128
128
O
267 280Right-handed alpha
Helix 129
129
O
293 301Right-handed alpha
Helix 130
130
O
332 346Right-handed alpha
Helix 131
131
O
355 372Right-handed alpha
Helix 132
132
O
374 389Right-handed alpha
Helix 133
133
O
396 404Right-handed alpha
Helix 134
134
O
406 420Right-handed alpha
Helix 135
135
O
429 433Right-handed 310
Helix 136
136
O
435 439Right-handed 310
Helix 137
137
P
11 18Right-handed alpha
Helix 138
138
P
29 32Right-handed 310
Helix 139
139
P
33 54Right-handed alpha
Helix 140
140
P
59 73Right-handed alpha
Helix 141
141
P
76 105Right-handed alpha
Helix 142
142
P
106 109Right-handed 310
Helix 143
143
P
110 134Right-handed alpha
Helix 144
144
P
137 150Right-handed alpha
Helix 145
145
P
151 154Right-handed 310
Helix 146
146
P
158 167Right-handed alpha
Helix 147
147
P
172 205Right-handed alpha
Helix 148
148
P
221 247Right-handed alpha
Helix 149
149
P
254 258Right-handed 310
Helix 150
150
P
272 274Right-handed 310
Helix 151
151
P
275 283Right-handed alpha
Helix 152
152
P
287 301Right-handed alpha
Helix 153
153
P
302 309Right-handed 310
Helix 154
154
P
319 341Right-handed alpha
Helix 155
155
P
347 365Right-handed alpha
Helix 156
156
P
365 378Right-handed alpha
Helix 157
157
Q
22 36Right-handed alpha
Helix 158
158
Q
37 40Right-handed 310
Helix 159
159
Q
47 52Right-handed alpha
Helix 160
160
Q
57 67Right-handed alpha
Helix 161
161
Q
97 104Right-handed alpha
Helix 162
162
Q
115 120Right-handed alpha
Helix 163
163
Q
122 133Right-handed alpha
Helix 164
164
Q
178 195Right-handed alpha
Helix 165
165
Q
197 232Right-handed alpha
Helix 166
166
R
1 5Right-handed 310
Helix 167
167
R
15 19Right-handed 310
Helix 168
168
R
28 61Right-handed alpha
Helix 169
169
R
102 107Right-handed alpha
Helix 170
170
R
108 111Right-handed 310
Helix 171
171
R
122 126Right-handed 310
Helix 172
172
S
12 25Right-handed alpha
Helix 173
173
S
26 30Right-handed 310
Helix 174
174
S
32 36Right-handed 310
Helix 175
175
S
40 49Right-handed alpha
Helix 176
176
S
51 72Right-handed alpha
Helix 177
177
S
76 80Right-handed 310
Helix 178
178
S
90 110Right-handed alpha
Helix 179
179
T
20 23Right-handed 310
Helix 180
180
T
32 46Right-handed alpha
Helix 181
181
T
48 69Right-handed alpha
Helix 182
182
T
73 77Right-handed 310
Helix 183
183
U
15 25Right-handed alpha
Helix 184
184
U
27 47Right-handed alpha
Helix 185
185
U
54 74Right-handed alpha
Helix 186
186
V
51 55Right-handed 310
Helix 187
187
W
4 13Right-handed alpha
Helix 188
188
W
16 47Right-handed alpha
Helix 189
189
W
51 56Right-handed alpha
Helix 190
190
W
57 59Right-handed 310
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There are 22 sheets in PDB entry 3H1L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
15 18first strand
Strand 2
A
24 29anti-parallel
Strand 3
A
196 201parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
95 102anti-parallel
Strand 6
A
85 90anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
279 281first strand
Strand 2
A
306 313anti-parallel
Strand 3
A
318 326anti-parallel
Strand 4
A
251 258anti-parallel
Strand 5
A
421 426anti-parallel
Strand 6
A
239 245parallel
Strand 7
G
11 18anti-parallel
Strand 8
D
234 237anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
26 27first strand
Strand 2
B
35 36anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
44 45first strand
Strand 2
B
111 112anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
204 206first strand
Strand 2
B
48 51anti-parallel
Strand 3
B
104 109anti-parallel
Strand 4
B
96 101anti-parallel
Strand 5
I
66 69anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
243 247first strand
Strand 2
B
423 428parallel
Strand 3
B
252 260anti-parallel
Strand 4
B
319 329anti-parallel
Strand 5
B
307 316anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
23 25first strand
Strand 2
C
218 220anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
148 149first strand
Strand 2
D
157 158anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
74 76first strand
Strand 2
E
193 195anti-parallel
Strand 3
E
185 186anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
85 89first strand
Strand 2
E
96 100anti-parallel
Strand 3
E
132 135anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
147 148first strand
Strand 2
E
156 158anti-parallel
Strand 3
E
163 165anti-parallel
Strand 4
E
171 173anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
15 18first strand
Strand 2
N
24 29anti-parallel
Strand 3
N
196 201parallel
Strand 4
N
34 41anti-parallel
Strand 5
N
95 102anti-parallel
Strand 6
N
85 90anti-parallel
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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
279 281first strand
Strand 2
N
306 313anti-parallel
Strand 3
N
318 326anti-parallel
Strand 4
N
251 258anti-parallel
Strand 5
N
421 426anti-parallel
Strand 6
N
239 245parallel
Strand 7
T
11 18anti-parallel
Strand 8
Q
234 237anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
26 28first strand
Strand 2
O
34 36anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
111 112first strand
Strand 2
O
44 51anti-parallel
Strand 3
O
204 209anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
111 112first strand
Strand 2
O
44 51anti-parallel
Strand 3
O
104 109anti-parallel
Strand 4
O
96 101anti-parallel
Strand 5
V
66 69anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
243 247first strand
Strand 2
O
422 428parallel
Strand 3
O
252 260anti-parallel
Strand 4
O
319 329anti-parallel
Strand 5
O
307 316anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
23 25first strand
Strand 2
P
218 220anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
148 149first strand
Strand 2
Q
157 158anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
74 76first strand
Strand 2
R
193 195anti-parallel
Strand 3
R
185 187anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
85 89first strand
Strand 2
R
96 100anti-parallel
Strand 3
R
132 135anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
R
147 148first strand
Strand 2
R
156 158anti-parallel
Strand 3
R
163 165anti-parallel
Strand 4
R
171 173anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il