Analysis of interatomic Contacts of Structural Units in PDB entry:
3HJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HJU entry

There are 2 chains in PDB entry 3HJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7ALA 297
B
 SER 6THR 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3HJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
54 57Right-handed 310
Helix 2
2
A
58 67Right-handed alpha
Helix 3
3
A
93 111Right-handed alpha
Helix 4
4
A
122 135Right-handed alpha
Helix 5
5
A
157 171Right-handed alpha
Helix 6
6
A
180 184Right-handed 310
Helix 7
7
A
187 196Right-handed alpha
Helix 8
8
A
206 224Right-handed alpha
Helix 9
9
A
225 227Right-handed 310
Helix 10
10
A
243 254Right-handed alpha
Helix 11
11
A
270 274Right-handed 310
Helix 12
12
A
275 296Right-handed alpha
Helix 13
13
B
15 19Right-handed 310
Helix 14
14
B
54 57Right-handed 310
Helix 15
15
B
58 68Right-handed alpha
Helix 16
16
B
93 111Right-handed alpha
Helix 17
17
B
122 135Right-handed alpha
Helix 18
18
B
155 160Right-handed alpha
Helix 19
19
B
161 166Right-handed alpha
Helix 20
20
B
180 184Right-handed 310
Helix 21
21
B
187 197Right-handed alpha
Helix 22
22
B
206 224Right-handed alpha
Helix 23
23
B
225 227Right-handed 310
Helix 24
24
B
243 254Right-handed alpha
Helix 25
25
B
270 274Right-handed 310
Helix 26
26
B
275 293Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3HJU.

There are 16 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
70 75anti-parallel
Strand 4
A
43 48parallel
Strand 5
A
116 121parallel
Strand 6
A
141 145parallel
Strand 7
A
231 236parallel
Strand 8
A
259 264parallel
Strand 9
B
259 264anti-parallel
Strand 10
B
231 236parallel
Strand 11
B
141 145parallel
Strand 12
B
116 121parallel
Strand 13
B
43 48parallel
Strand 14
B
70 75parallel
Strand 15
B
29 35anti-parallel
Strand 16
B
21 23anti-parallel
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