Analysis of interatomic Contacts of Structural Units in PDB entry:
3HNB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HNB entry

There is 1 chain in PDB entry 3HNB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 SER 2173ALA 2328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 3HNB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
M
2186 2188Right-handed 310
Helix 2
2
M
2204 2208Right-handed 310
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There are 4 sheets in PDB entry 3HNB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2176 2177first strand
Strand 2
M
2320 2327anti-parallel
Strand 3
M
2230 2246anti-parallel
Strand 4
M
2293 2314anti-parallel
Strand 5
M
2253 2265anti-parallel
Strand 6
M
2283 2284anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2190 2192first strand
Strand 2
M
2230 2246anti-parallel
Strand 3
M
2293 2314anti-parallel
Strand 4
M
2253 2265anti-parallel
Strand 5
M
2272 2273anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2248 2250first strand
Strand 2
M
2253 2265anti-parallel
Strand 3
M
2283 2284anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
2275 2276first strand
Strand 2
M
2279 2280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il