Analysis of interatomic Contacts of Structural Units in PDB entry:
3HR4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HR4 entry

There are 8 chains in PDB entry 3HR4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 511THR 699
B
GLN 3ALA 147
C
GLU 512THR 699
D
GLN 3ALA 147
E
ARG 511THR 699
F
GLN 3ALA 147
G
GLU 512TYR 698
H
GLN 3ALA 147
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 3HR4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
514 535Right-handed alpha
Helix 2
2
A
548 562Right-handed alpha
Helix 3
3
A
573 575Right-handed 310
Helix 4
4
A
576 582Right-handed 310
Helix 5
5
A
599 601Right-handed 310
Helix 6
6
A
602 612Right-handed alpha
Helix 7
7
A
635 649Right-handed alpha
Helix 8
8
A
664 684Right-handed alpha
Helix 9
9
A
688 692Right-handed 310
Helix 10
10
B
5 20Right-handed alpha
Helix 11
11
B
28 39Right-handed alpha
Helix 12
12
B
44 56Right-handed alpha
Helix 13
13
B
65 77Right-handed alpha
Helix 14
14
B
80 93Right-handed alpha
Helix 15
15
B
101 112Right-handed alpha
Helix 16
16
B
117 127Right-handed alpha
Helix 17
17
B
137 146Right-handed alpha
Helix 18
18
C
514 536Right-handed alpha
Helix 19
19
C
551 562Right-handed alpha
Helix 20
20
C
576 582Right-handed 310
Helix 21
21
C
599 612Right-handed alpha
Helix 22
22
C
635 648Right-handed alpha
Helix 23
23
C
664 683Right-handed alpha
Helix 24
24
C
688 692Right-handed 310
Helix 25
25
D
5 20Right-handed alpha
Helix 26
26
D
28 39Right-handed alpha
Helix 27
27
D
44 56Right-handed alpha
Helix 28
28
D
65 76Right-handed alpha
Helix 29
29
D
80 93Right-handed alpha
Helix 30
30
D
101 112Right-handed alpha
Helix 31
31
D
117 126Right-handed alpha
Helix 32
32
D
138 147Right-handed alpha
Helix 33
33
E
514 534Right-handed alpha
Helix 34
34
E
548 561Right-handed alpha
Helix 35
35
E
562 564Right-handed 310
Helix 36
36
E
573 575Right-handed 310
Helix 37
37
E
576 581Right-handed 310
Helix 38
38
E
599 601Right-handed 310
Helix 39
39
E
602 610Right-handed alpha
Helix 40
40
E
635 648Right-handed alpha
Helix 41
41
E
664 678Right-handed alpha
Helix 42
42
F
5 20Right-handed alpha
Helix 43
43
F
28 39Right-handed alpha
Helix 44
44
F
44 54Right-handed alpha
Helix 45
45
F
65 77Right-handed alpha
Helix 46
46
F
81 93Right-handed alpha
Helix 47
47
F
101 112Right-handed alpha
Helix 48
48
F
117 126Right-handed alpha
Helix 49
49
F
138 146Right-handed alpha
Helix 50
50
G
514 535Right-handed alpha
Helix 51
51
G
548 562Right-handed alpha
Helix 52
52
G
576 580Right-handed 310
Helix 53
53
G
603 611Right-handed alpha
Helix 54
54
G
635 649Right-handed alpha
Helix 55
55
G
661 683Right-handed alpha
Helix 56
56
H
5 20Right-handed alpha
Helix 57
57
H
28 37Right-handed alpha
Helix 58
58
H
38 40Right-handed 310
Helix 59
59
H
44 56Right-handed alpha
Helix 60
60
H
64 76Right-handed alpha
Helix 61
61
H
81 91Right-handed alpha
Helix 62
62
H
101 112Right-handed alpha
Helix 63
63
H
117 127Right-handed alpha
Helix 64
64
H
138 146Right-handed alpha
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There are 10 sheets in PDB entry 3HR4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
566 571first strand
Strand 2
A
538 544parallel
Strand 3
A
585 591parallel
Strand 4
A
620 627parallel
Strand 5
A
651 652parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
566 571first strand
Strand 2
A
538 544parallel
Strand 3
A
585 591parallel
Strand 4
A
620 627parallel
Strand 5
A
657 660parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
26 27first strand
Strand 2
B
63 64anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
566 571first strand
Strand 2
C
538 544parallel
Strand 3
C
585 591parallel
Strand 4
C
620 627parallel
Strand 5
C
651 660parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
26 27first strand
Strand 2
D
63 64anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
99 100first strand
Strand 2
D
136 137anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
568 571first strand
Strand 2
E
540 543parallel
Strand 3
E
585 591parallel
Strand 4
E
620 627parallel
Strand 5
E
651 660parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
26 27first strand
Strand 2
F
63 64anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
99 100first strand
Strand 2
F
136 137anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
565 566first strand
Strand 2
G
537 544parallel
Strand 3
G
585 591parallel
Strand 4
G
620 627parallel
Strand 5
G
651 660parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il