Analysis of interatomic Contacts of Structural Units in PDB entry:
3JRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3JRV entry

There are 5 chains in PDB entry 3JRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6ASN 149
B
 ASP 6ASN 149
C
 LYS 81GLY 89
D
 SER 82ARG 88
E
 SER 82SER 86
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3JRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 10Right-handed 310
Helix 2
2
A
22 24Right-handed 310
Helix 3
3
A
25 43Right-handed alpha
Helix 4
4
A
51 59Right-handed alpha
Helix 5
5
A
59 69Right-handed alpha
Helix 6
6
A
69 81Right-handed alpha
Helix 7
7
A
88 92Right-handed 310
Helix 8
8
A
94 115Right-handed alpha
Helix 9
9
A
118 122Right-handed 310
Helix 10
10
A
127 132Right-handed alpha
Helix 11
11
A
133 149Right-handed alpha
Helix 12
12
B
6 10Right-handed 310
Helix 13
13
B
22 24Right-handed 310
Helix 14
14
B
25 43Right-handed alpha
Helix 15
15
B
51 59Right-handed alpha
Helix 16
16
B
59 69Right-handed alpha
Helix 17
17
B
69 82Right-handed alpha
Helix 18
18
B
88 92Right-handed 310
Helix 19
19
B
94 115Right-handed alpha
Helix 20
20
B
118 122Right-handed 310
Helix 21
21
B
127 132Right-handed alpha
Helix 22
22
B
133 149Right-handed alpha
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There are no sheets in PDB entry 3JRV
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il