Analysis of interatomic Contacts of Structural Units in PDB entry:
3KVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KVH entry

There is 1 chain in PDB entry 3KVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 9LEU 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3KVH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 18Right-handed alpha
Helix 2
2
A
41 43Right-handed 310
Helix 3
3
A
73 81Right-handed alpha
Helix 4
4
A
92 94Right-handed 310
Helix 5
5
A
118 131Right-handed alpha
Helix 6
6
A
156 162Right-handed alpha
Helix 7
7
A
168 180Right-handed alpha
Helix 8
8
A
184 207Right-handed alpha
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There are 2 sheets in PDB entry 3KVH. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
11 12first strand
Strand 2
A
96 101anti-parallel
Strand 3
A
108 116anti-parallel
Strand 4
A
25 40parallel
Strand 5
A
44 55anti-parallel
Strand 6
A
64 67first strand
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
60 61first strand
Strand 2
A
44 55anti-parallel
Strand 3
A
25 40anti-parallel
Strand 4
A
139 145first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il