Analysis of interatomic Contacts of Structural Units in PDB entry:
3KVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3KVO entry

There are 2 chains in PDB entry 3KVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 275
B
 MET 1GLU 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3KVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 32Right-handed alpha
Helix 2
2
A
53 64Right-handed alpha
Helix 3
3
A
77 93Right-handed alpha
Helix 4
4
A
114 125Right-handed alpha
Helix 5
5
A
125 141Right-handed alpha
Helix 6
6
A
158 162Right-handed 310
Helix 7
7
A
165 186Right-handed alpha
Helix 8
8
A
203 210Right-handed alpha
Helix 9
9
A
214 218Right-handed 310
Helix 10
10
A
221 233Right-handed alpha
Helix 11
11
A
245 252Right-handed alpha
Helix 12
12
A
256 261Right-handed 310
Helix 13
13
B
20 32Right-handed alpha
Helix 14
14
B
53 65Right-handed alpha
Helix 15
15
B
77 93Right-handed alpha
Helix 16
16
B
114 125Right-handed alpha
Helix 17
17
B
125 141Right-handed alpha
Helix 18
18
B
159 164Right-handed alpha
Helix 19
19
B
165 186Right-handed alpha
Helix 20
20
B
203 211Right-handed alpha
Helix 21
21
B
213 218Right-handed 310
Helix 22
22
B
220 233Right-handed alpha
Helix 23
23
B
245 252Right-handed alpha
Helix 24
24
B
256 261Right-handed 310
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There are 2 sheets in PDB entry 3KVO. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
36 41parallel
Strand 3
A
12 16parallel
Strand 4
A
97 100parallel
Strand 5
A
147 151parallel
Strand 6
A
191 196parallel
Strand 7
A
242 244parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 72first strand
Strand 2
B
36 41parallel
Strand 3
B
12 16parallel
Strand 4
B
97 100parallel
Strand 5
B
147 150parallel
Strand 6
B
191 196parallel
Strand 7
B
242 244parallel
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