Analysis of interatomic Contacts of Structural Units in PDB entry:
3L0I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L0I entry

There are 4 chains in PDB entry 3L0I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 210TYR 534
B
 SER 3MSE 176
C
 PRO 209TYR 532
D
 SER 3MSE 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3L0I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
213 225Right-handed alpha
Helix 2
2
A
239 244Right-handed alpha
Helix 3
3
A
244 259Right-handed alpha
Helix 4
4
A
270 281Right-handed alpha
Helix 5
5
A
285 308Right-handed alpha
Helix 6
6
A
319 321Right-handed 310
Helix 7
7
A
322 362Right-handed alpha
Helix 8
8
A
364 382Right-handed alpha
Helix 9
9
A
385 390Right-handed alpha
Helix 10
10
A
391 394Right-handed 310
Helix 11
11
A
399 420Right-handed alpha
Helix 12
12
A
427 448Right-handed alpha
Helix 13
13
A
463 479Right-handed alpha
Helix 14
14
A
490 507Right-handed alpha
Helix 15
15
A
511 520Right-handed alpha
Helix 16
16
A
525 530Right-handed alpha
Helix 17
17
B
38 45Right-handed alpha
Helix 18
18
B
96 111Right-handed alpha
Helix 19
19
B
140 145Right-handed alpha
Helix 20
20
B
158 169Right-handed alpha
Helix 21
21
C
210 226Right-handed alpha
Helix 22
22
C
244 260Right-handed alpha
Helix 23
23
C
270 281Right-handed alpha
Helix 24
24
C
285 310Right-handed alpha
Helix 25
25
C
319 362Right-handed alpha
Helix 26
26
C
364 382Right-handed alpha
Helix 27
27
C
385 390Right-handed alpha
Helix 28
28
C
391 394Right-handed 310
Helix 29
29
C
399 420Right-handed alpha
Helix 30
30
C
427 448Right-handed alpha
Helix 31
31
C
463 479Right-handed alpha
Helix 32
32
C
490 507Right-handed alpha
Helix 33
33
C
511 520Right-handed alpha
Helix 34
34
C
525 530Right-handed alpha
Helix 35
35
D
23 29Right-handed 310
Helix 36
36
D
38 45Right-handed alpha
Helix 37
37
D
69 73Right-handed 310
Helix 38
38
D
77 82Right-handed alpha
Helix 39
39
D
95 113Right-handed alpha
Helix 40
40
D
135 146Right-handed alpha
Helix 41
41
D
158 175Right-handed alpha
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There are 5 sheets in PDB entry 3L0I. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 485first strand
Strand 2
A
488 489anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 55first strand
Strand 2
B
58 65anti-parallel
Strand 3
B
10 17parallel
Strand 4
B
86 89parallel
Strand 5
B
118 121parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
237 239first strand
Strand 2
C
316 318anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
484 485first strand
Strand 2
C
488 489anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 55first strand
Strand 2
D
58 65anti-parallel
Strand 3
D
10 18parallel
Strand 4
D
86 92parallel
Strand 5
D
118 124parallel
Strand 6
D
150 153parallel
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