Analysis of interatomic Contacts of Structural Units in PDB entry:
3L3N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3L3N entry

There is 1 chain in PDB entry 3L3N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 40PRO 617
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 3L3N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
40 71Right-handed alpha
Helix 2
2
A
74 100Right-handed alpha
Helix 3
3
A
109 120Right-handed alpha
Helix 4
4
A
122 127Right-handed 310
Helix 5
5
A
128 149Right-handed alpha
Helix 6
6
A
163 172Right-handed alpha
Helix 7
7
A
174 195Right-handed alpha
Helix 8
8
A
196 211Right-handed alpha
Helix 9
9
A
215 222Right-handed alpha
Helix 10
10
A
223 225Right-handed 310
Helix 11
11
A
228 240Right-handed alpha
Helix 12
12
A
240 260Right-handed alpha
Helix 13
13
A
283 285Right-handed 310
Helix 14
14
A
286 291Right-handed alpha
Helix 15
15
A
300 308Right-handed alpha
Helix 16
16
A
311 326Right-handed alpha
Helix 17
17
A
332 339Right-handed alpha
Helix 18
18
A
374 394Right-handed alpha
Helix 19
19
A
398 402Right-handed 310
Helix 20
20
A
406 422Right-handed alpha
Helix 21
21
A
423 430Right-handed alpha
Helix 22
22
A
439 455Right-handed alpha
Helix 23
23
A
456 473Right-handed alpha
Helix 24
24
A
480 494Right-handed alpha
Helix 25
25
A
506 511Right-handed 310
Helix 26
26
A
520 541Right-handed alpha
Helix 27
27
A
546 550Right-handed 310
Helix 28
28
A
555 568Right-handed alpha
Helix 29
29
A
573 583Right-handed alpha
Helix 30
30
A
589 610Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3L3N. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 152first strand
Strand 2
A
158 160anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 271first strand
Strand 2
A
495 496parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 358first strand
Strand 2
A
365 368anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il